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    mrpl3 mitochondrial ribosomal protein L3 [ Strongylocentrotus purpuratus (purple sea urchin) ]

    Gene ID: 756465, updated on 17-Aug-2024

    Summary

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    Symbol
    mrpl3
    Full Name
    mitochondrial ribosomal protein L3
    Primary source
    EchinoBase:ECB-GENE-23181153
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Strongylocentrotus purpuratus
    Lineage
    Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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    Genomic context

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    See mrpl3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145614.1 (1291781..1315199)
    Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003577251.1 (336127..393305)

    NW_022145614.1Genomic Context describing neighboring genes Neighboring gene glutathione S-transferase omega-1 Neighboring gene V(D)J recombination-activating protein 1-like Neighboring gene uncharacterized LOC100887836 Neighboring gene glutamic-oxaloacetic transaminase 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis. Tu Q, et al. Genome Res, 2012 Oct. PMID 22709795, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mitochondrial large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    39S ribosomal protein L3, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Spur_5.0 Primary Assembly

    Genomic

    1. NW_022145614.1 Reference Spur_5.0 Primary Assembly

      Range
      1291781..1315199
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030976249.1 → XP_030832109.1  39S ribosomal protein L3, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A7M7N722

    2. XM_030976251.1 → XP_030832111.1  39S ribosomal protein L3, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A7M7N8W2
      Conserved Domains (1) summary
      cl00324
      Location:23 → 227
      RplC; Ribosomal protein L3 [Translation, ribosomal structure and biogenesis]
    Nucleotide Protein
    Heading Accession and Version

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