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    NAL94_RS16325 GGDEF domain-containing protein [ Vibrio alginolyticus ]

    Gene ID: 75167802, updated on 10-Oct-2024

    Summary

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    Gene symbol
    NAL94_RS16325
    Gene description
    GGDEF domain-containing protein
    Locus tag
    NAL94_RS16325
    Gene type
    protein coding
    Organism
    Vibrio alginolyticus (strain: E110, nat-host: Penaeus vannamei)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    Old locus tag
    NAL94_16330
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    Genomic context

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    Location:
    chromosome: 2

    2 - NZ_CP098034.1Genomic Context describing neighboring genes Neighboring gene NlpC/P60 family protein Neighboring gene DUF3802 family protein Neighboring gene response regulator Neighboring gene fructosamine kinase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP098034.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Temporal Transcriptional Responses of a Vibrio alginolyticus Strain to Podoviridae Phage HH109 Revealed by RNA-Seq. Li X, et al. mSystems, 2022 Apr 26. PMID 35400200, Free PMC Article
    2. Phenotypic convergence mediated by GGDEF-domain-containing proteins. Simm R, et al. J Bacteriol, 2005 Oct. PMID 16166544, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    GGDEF domain-containing protein
    WP_005377621.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP098034.1 Reference assembly

      Range
      1690033..1690995 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005377621.1 MULTISPECIES: GGDEF domain-containing protein [Vibrio]

      See identical proteins and their annotated locations for WP_005377621.1

      UniProtKB/TrEMBL
      A0A0S3JTL9, A0A2I3C1Q7, A0AAP5WKR3, A0AAP5YV40, A0AAP6D2D1
      Conserved Domains (1) summary
      cd01949
      Location:157 → 315
      GGDEF; Diguanylate-cyclase (DGC) or GGDEF domain
    Nucleotide Protein
    Heading Accession and Version