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    K5Q05_RS03070 LysM peptidoglycan-binding domain-containing protein [ Borrelia miyamotoi ]

    Gene ID: 75118327, updated on 10-Oct-2024

    Summary

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    Gene symbol
    K5Q05_RS03070
    Gene description
    LysM peptidoglycan-binding domain-containing protein
    Locus tag
    K5Q05_RS03070
    Gene type
    protein coding
    Organism
    Borrelia miyamotoi (strain: HT31, nat-host: Ixodes persulcatus, type-material: type strain of Borrelia miyamotoi)
    Lineage
    Bacteria; Spirochaetota; Spirochaetia; Spirochaetales; Borreliaceae; Borrelia
    Old locus tag
    BmHH_00634
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    Genomic context

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    NZ_AP024371.1Genomic Context describing neighboring genes Neighboring gene acetate kinase Neighboring gene transcription-repair coupling factor Neighboring gene hypothetical protein Neighboring gene tRNA-Asn Neighboring gene M18 family aminopeptidase Neighboring gene ribonuclease M5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_AP024371.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Modular design of the Enterococcus hirae muramidase-2 and Streptococcus faecalis autolysin. Joris B, et al. FEMS Microbiol Lett, 1992 Mar 15. PMID 1352512
    2. The structure of a LysM domain from E. coli membrane-bound lytic murein transglycosylase D (MltD). Bateman A, et al. J Mol Biol, 2000 Jun 16. PMID 10843862

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    LysM peptidoglycan-binding domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_AP024371.1 Reference assembly

      Range
      650640..652703
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_165940959.1 LysM peptidoglycan-binding domain-containing protein [Borrelia miyamotoi]

      UniProtKB/TrEMBL
      A0AAP8YRW4
      Conserved Domains (3) summary
      PRK06347
      Location:42 → 325
      PRK06347; 1,4-beta-N-acetylmuramoylhydrolase
      COG0860
      Location:419 → 687
      AmiC; N-acetylmuramoyl-L-alanine amidase [Cell wall/membrane/envelope biogenesis]
      pfam01476
      Location:214 → 255
      LysM; LysM domain
    Nucleotide Protein
    Heading Accession and Version