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    LOC7468120 transcription factor MYB108 [ Populus trichocarpa (black cottonwood) ]

    Gene ID: 7468120, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC7468120
    Gene description
    transcription factor MYB108
    Locus tag
    POPTR_010G149900v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus trichocarpa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

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    See LOC7468120 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current P.trichocarpa_v4.1 (GCF_000002775.5) 10 NC_037294.2 (16013281..16015226, complement)
    101 previous assembly Pop_tri_v3 (GCF_000002775.4) 10 NC_037294.1 (15850324..15852331, complement)

    Chromosome 10 - NC_037294.2Genomic Context describing neighboring genes Neighboring gene gibberellin 2-beta-dioxygenase 2 Neighboring gene uncharacterized LOC127905903 Neighboring gene E3 ubiquitin-protein ligase UPL6 Neighboring gene uncharacterized LOC127905867

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor MYB108

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.trichocarpa_v4.1 Primary Assembly

    Genomic

    1. NC_037294.2 Reference P.trichocarpa_v4.1 Primary Assembly

      Range
      16013281..16015226 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002316024.4 → XP_002316060.2  transcription factor MYB108

      See identical proteins and their annotated locations for XP_002316060.2

      UniProtKB/TrEMBL
      B9HX62
      Conserved Domains (1) summary
      cl28544
      Location:25 → 138
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
    Nucleotide Protein
    Heading Accession and Version

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