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    LOC7467922 uncharacterized LOC7467922 [ Populus trichocarpa (black cottonwood) ]

    Gene ID: 7467922, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC7467922
    Gene description
    uncharacterized LOC7467922
    Locus tag
    POPTR_018G063400v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus trichocarpa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

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    See LOC7467922 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    102 current P.trichocarpa_v4.1 (GCF_000002775.5) 18 NC_037302.2 (7488624..7491681)
    101 previous assembly Pop_tri_v3 (GCF_000002775.4) 18 NC_037302.1 (7941612..7944726)

    Chromosome 18 - NC_037302.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC127904697 Neighboring gene sucrose synthase Neighboring gene uncharacterized LOC112325050

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in response to auxin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC7467922

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.trichocarpa_v4.1 Primary Assembly

    Genomic

    1. NC_037302.2 Reference P.trichocarpa_v4.1 Primary Assembly

      Range
      7488624..7491681
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002324688.3 → XP_002324724.1  uncharacterized protein LOC7467922 isoform X1

      See identical proteins and their annotated locations for XP_002324724.1

      UniProtKB/TrEMBL
      B9INC4
      Conserved Domains (1) summary
      pfam02519
      Location:16 → 142
      Auxin_inducible; Auxin responsive protein

    2. XM_024590024.2 → XP_024445792.1  uncharacterized protein LOC7467922 isoform X2

      UniProtKB/TrEMBL
      A0A2K1WWS0
      Conserved Domains (1) summary
      pfam02519
      Location:16 → 142
      Auxin_inducible; Auxin responsive protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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