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    LOC7465553 1-aminocyclopropane-1-carboxylate synthase [ Populus trichocarpa (black cottonwood) ]

    Gene ID: 7465553, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC7465553
    Gene description
    1-aminocyclopropane-1-carboxylate synthase
    Locus tag
    POPTR_007G007800v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus trichocarpa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

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    See LOC7465553 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current P.trichocarpa_v4.1 (GCF_000002775.5) 7 NC_037291.2 (565191..567593)
    101 previous assembly Pop_tri_v3 (GCF_000002775.4) 7 NC_037291.1 (571593..574046)

    Chromosome 7 - NC_037291.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112328141 Neighboring gene squalene monooxygenase SE1 Neighboring gene GTP-binding protein At3g49725, chloroplastic Neighboring gene transcription factor RAX3 Neighboring gene branched-chain amino acid aminotransferase 2, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 1-aminocyclopropane-1-carboxylate synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in amino acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    1-aminocyclopropane-1-carboxylate synthase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.trichocarpa_v4.1 Primary Assembly

    Genomic

    1. NC_037291.2 Reference P.trichocarpa_v4.1 Primary Assembly

      Range
      565191..567593
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002310842.3 → XP_002310878.1  1-aminocyclopropane-1-carboxylate synthase

      See identical proteins and their annotated locations for XP_002310878.1

      UniProtKB/TrEMBL
      B9HFU1
      Conserved Domains (1) summary
      PLN02450
      Location:1 → 466
      PLN02450; 1-aminocyclopropane-1-carboxylate synthase
    Nucleotide Protein
    Heading Accession and Version

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