U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC7455766 peroxidase A2 [ Populus trichocarpa (black cottonwood) ]

    Gene ID: 7455766, updated on 6-Jun-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC7455766
    Gene description
    peroxidase A2
    Locus tag
    POPTR_001G012901v4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus trichocarpa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
    Also known as
    PRX7; peroxidase
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    102 current P.trichocarpa_v4.1 (GCF_000002775.5) 1 NC_037285.2 (901594..908963, complement)
    101 previous assembly Pop_tri_v3 (GCF_000002775.4) 1 NC_037285.1 (883522..885172, complement)

    Chromosome 1 - NC_037285.2Genomic Context describing neighboring genes Neighboring gene delta(12)-fatty-acid desaturase FAD2 Neighboring gene nucleolar complex-associated protein 2 Neighboring gene peroxidase C1A-like Neighboring gene zinc finger CCCH domain-containing protein 14

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The syringaldazine-oxidizing peroxidase PXP 3-4 from poplar xylem: cDNA isolation, characterization and expression. Christensen JH, et al. Plant Mol Biol, 2001 Nov. PMID 11725944

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hydrogen peroxide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    peroxidase A2; peroxidase E5
    Names
    class III peroxidase

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.trichocarpa_v4.1 Primary Assembly

    Genomic

    1. NC_037285.2 Reference P.trichocarpa_v4.1 Primary Assembly

      Range
      901594..908963 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002299116.4 → XP_002299152.4  peroxidase E5 isoform X3

      UniProtKB/TrEMBL
      W8PVQ4

    2. XM_052456880.1 → XP_052312840.1  peroxidase A2 isoform X2

      UniProtKB/TrEMBL
      Q43099

    3. XM_052456877.1 → XP_052312837.1  peroxidase A2 isoform X1

      UniProtKB/TrEMBL
      Q43099
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials