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    rpsK 30S ribosomal protein S11 [ Rhodanobacter denitrificans ]

    Gene ID: 72425987, updated on 10-Oct-2024

    Summary

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    Gene symbol
    rpsK
    Gene description
    30S ribosomal protein S11
    Locus tag
    LRK52_RS05030
    Gene type
    protein coding
    Organism
    Rhodanobacter denitrificans (strain: FW104-R5)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Rhodanobacteraceae; Rhodanobacter
    Old locus tag
    LRK52_05030
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    Genomic context

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    NZ_CP088980.1Genomic Context describing neighboring genes Neighboring gene preprotein translocase subunit SecY Neighboring gene 30S ribosomal protein S13 Neighboring gene 30S ribosomal protein S4 Neighboring gene DNA-directed RNA polymerase subunit alpha

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP088980.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A functional interaction between ribosomal proteins S7 and S11 within the bacterial ribosome. Robert F, et al. J Biol Chem, 2003 Nov 7. PMID 12937172
    2. Primary structure of protein S11 from Escherichia coli ribosomes. Kamp R, et al. FEBS Lett, 1980 Nov 17. PMID 7007074
    3. Amino acid sequences of ribosomal proteins S11 from Bacillus stearothermophilus and S19 from Halobacterium marismortui. Comparison of the ribosomal protein S11 family. Kimura M, et al. FEBS Lett, 1988 Nov 21. PMID 3191988
    4. Interaction of ribosomal proteins S5, S6, S11, S12, S18 and S21 with 16 S rRNA. Stern S, et al. J Mol Biol, 1988 Jun 20. PMID 2459389
    5. Genomic Features and Pervasive Negative Selection in Rhodanobacter Strains Isolated from Nitrate and Heavy Metal Contaminated Aquifer. Peng M, et al. Microbiol Spectr, 2022 Feb 23. PMID 35107332, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    30S ribosomal protein S11

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP088980.1 Reference assembly

      Range
      1104715..1105101
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_007513384.1 MULTISPECIES: 30S ribosomal protein S11 [Rhodanobacteraceae]

      See identical proteins and their annotated locations for WP_007513384.1

      UniProtKB/TrEMBL
      A0A023NTN0, A0A075KA69, A0A0F3K569, A0A0G9GYQ0, A0A0G9HCE4, A0A0Q9PAY7, A0A0Q9QH51, A0A154QMA3, A0A154QYU6, A0A160N0T0, A0A1E4HJF5, A0A1E4Q4V1, A0A1G7YTB2, A0A1H6ZTN7, A0A1I0NRA9, A0A1I2IZX2, A0A1I6MV85, A0A1K1QJH5, A0A1M3P793, A0A1M7CH70, A0A1T5FJW2, A0A1V3P299, A0A1V3PDF6, A0A1V3PLB8, A0A1V3PS75, A0A1V3Q6R6, A0A1V3Q9X3, A0A2N7QQK5, A0A2T5LEV3, A0A318DS11, A0A369UPH7, A0A370K5D6, A0A4R0Z1N8, A0A4R3YLV3, A0A4S3KDD6, A0A4Y5Z0M8, A0A502CCM3, A0A522SZA9, A0A7G8Q6Q1, A0A7V8FCP9, A0A7W5ELD9, A0A7W8NBK0, A0A7X0AF43, A0A7X0E7C7, A0A7X5ZJX6, A0A846VEP2, A0A9X5ED38, A0AA96EJ58, A0AAQ0CNS4, I4VZ43, I4WKT5, M4NK53
      Conserved Domains (1) summary
      PRK05309
      Location:13 → 128
      PRK05309; 30S ribosomal protein S11; Validated
    Nucleotide Protein
    Heading Accession and Version

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