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    AMD14_RS22325 TonB-dependent receptor [ Xanthomonas citri pv. citri ]

    Gene ID: 66913339, updated on 10-Oct-2024

    Summary

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    Gene symbol
    AMD14_RS22325
    Gene description
    TonB-dependent receptor
    Locus tag
    AMD14_RS22325
    Gene type
    protein coding
    Organism
    Xanthomonas citri pv. citri (strain: MN12, pathovar: citri, nat-host: citrus spp., sub-species: citri)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Lysobacterales; Lysobacteraceae; Xanthomonas
    Old locus tag
    J164_04503; J164_RS22375
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    Genomic context

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    NZ_CP008998.1Genomic Context describing neighboring genes Neighboring gene rhomboid family intramembrane serine protease Neighboring gene glycerophosphodiester phosphodiesterase Neighboring gene phosphatase PAP2 family protein Neighboring gene tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP008998.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Positive selection is the main driving force for evolution of citrus canker-causing Xanthomonas. Zhang Y, et al. ISME J, 2015 Oct. PMID 25689023, Free PMC Article
    2. Crystal structure of the outer membrane active transporter FepA from Escherichia coli. Buchanan SK, et al. Nat Struct Biol, 1999 Jan. PMID 9886293

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    TonB-dependent receptor

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP008998.1 Reference assembly

      Range
      5114465..5116765 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011052924.1 MULTISPECIES: TonB-dependent receptor [Xanthomonas]

      See identical proteins and their annotated locations for WP_011052924.1

      UniProtKB/TrEMBL
      A0A0U5F885, A0A7S7C1M3, A0A9X6BE04, A0AAN4RVU3, M4U3Q9
      Conserved Domains (1) summary
      cl21487
      Location:53 → 766
      OM_channels; Porin superfamily. These outer membrane channels share a beta-barrel structure that differ in strand and shear number. Classical (gram-negative ) porins are non-specific channels for small hydrophillic molecules and form 16 beta-stranded barrels (16,20) ...
    Nucleotide Protein
    Heading Accession and Version

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