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    E5165_RS12355 T9SS type A sorting domain-containing protein [ Flavobacterium psychrophilum ]

    Gene ID: 66553916, updated on 31-Mar-2024

    Summary

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    Gene symbol
    E5165_RS12355
    Gene description
    T9SS type A sorting domain-containing protein
    Locus tag
    E5165_RS12355
    Gene type
    protein coding
    Organism
    Flavobacterium psychrophilum (strain: 160401-1/5N, nat-host: rainbow trout)
    Lineage
    Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium
    Old locus tag
    E5165_01535
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    Genomic context

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    NZ_CP039120.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene IS982 family transposase Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP039120.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. PG0026 is the C-terminal signal peptidase of a novel secretion system of Porphyromonas gingivalis. Glew MD, et al. J Biol Chem, 2012 Jul 13. PMID 22593568, Free PMC Article
    2. Protein substrates of a novel secretion system are numerous in the Bacteroidetes phylum and have in common a cleavable C-terminal secretion signal, extensive post-translational modification, and cell-surface attachment. Veith PD, et al. J Proteome Res, 2013 Oct 4. PMID 24007199

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    T9SS type A sorting domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP039120.2 Reference assembly

      Range
      2784691..2787009 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011962457.1 T9SS type A sorting domain-containing protein [Flavobacterium psychrophilum]

      See identical proteins and their annotated locations for WP_011962457.1

      Conserved Domains (2) summary
      TIGR04183
      Location:694 → 772
      Por_Secre_tail; Por secretion system C-terminal sorting domain
      cl21494
      Location:173 → 217
      Abhydrolase; alpha/beta hydrolases
    Nucleotide Protein
    Heading Accession and Version