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    LOC6626838 protein brown [ Drosophila virilis ]

    Gene ID: 6626838, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6626838
    Gene description
    protein brown
    Locus tag
    Dvir_GJ19977
    See related
    EnsemblRapid:LOC6626838
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila virilis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Also known as
    bw; brown; bw-PA; Dvir\bw; GJ19977; Dvir\bw-PA; GJ19977-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6626838 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587567.1 (7317517..7321402)

    NW_022587567.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116651001 Neighboring gene uncharacterized LOC116650988 Neighboring gene queuosine salvage protein Neighboring gene uncharacterized LOC6626837 Neighboring gene uncharacterized LOC6626961 Neighboring gene RAS oncogene family member RabX1 Neighboring gene uncharacterized LOC6626835

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022587567 Unplaced Scaffold Reference DvirRS2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Conservation of brown gene trans-inactivation in Drosophila. Martin-Morris LE, et al. Genetics, 1995 May. PMID 7635284, Free PMC Article
    2. Evolutionary dynamics of the SGM transposon family in the Drosophila obscura species group. Miller WJ, et al. Mol Biol Evol, 2000 Nov. PMID 11070048
    3. Analysis of conserved noncoding DNA in Drosophila reveals similar constraints in intergenic and intronic sequences. Bergman CM, et al. Genome Res, 2001 Aug. PMID 11483574
    4. The evolution of codon preferences in Drosophila: a maximum-likelihood approach to parameter estimation and hypothesis testing. McVean GA, et al. J Mol Evol, 1999 Jul. PMID 10368435
    5. Substitution rates in Drosophila nuclear genes: implications for translational selection. Dunn KA, et al. Genetics, 2001 Jan. PMID 11139510, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ABC-type transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein brown
    Names
    Dvir\GJ19977
    Dvir\GJ19977-PA
    dvir_GLEANR_5442

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DvirRS2

    Genomic

    1. NW_022587567.1 Reference DvirRS2

      Range
      7317517..7321402
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002050804.3 → XP_002050840.1  protein brown

      See identical proteins and their annotated locations for XP_002050840.1

      UniProtKB/Swiss-Prot
      Q24739
      UniProtKB/TrEMBL
      B4LMD8
      Related
      XP_002050840.1, XM_002050804.3
      Conserved Domains (3) summary
      TIGR00955
      Location:37 → 667
      3a01204; The Eye Pigment Precursor Transporter (EPP) Family protein
      pfam01061
      Location:398 → 599
      ABC2_membrane; ABC-2 type transporter
      cl21455
      Location:28 → 310
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein Strain
    Heading Accession and Version

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