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    CtBP C-terminal Binding Protein [ Tribolium castaneum (red flour beetle) ]

    Gene ID: 660954, updated on 6-Jun-2024

    Summary

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    Gene symbol
    CtBP
    Gene description
    C-terminal Binding Protein
    Locus tag
    TcasGA2_TC012453
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tribolium castaneum
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Tenebrionidae; Tenebrionidae incertae sedis; Tribolium
    Orthologs
    fruit fly all
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    Genomic context

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    See CtBP in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_04 current icTriCast1.1 (GCF_031307605.1) 2 NC_087395.1 (17856044..17868214)
    103 previous assembly Tcas5.2 (GCF_000002335.3) Linkage Group LG9 NC_007424.3 (7720516..7733046)

    Chromosome 2 - NC_087395.1Genomic Context describing neighboring genes Neighboring gene heme transporter FLVCR2 Neighboring gene mitochondrial enolase superfamily member 1 Neighboring gene Chromosome transmission fidelity 4 Neighboring gene solute carrier family 2, facilitated glucose transporter member 2 Neighboring gene myoblast city Neighboring gene dynactin subunit 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum. Kim HS, et al. Nucleic Acids Res, 2010 Jan. PMID 19820115, Free PMC Article
    2. The genome of the model beetle and pest Tribolium castaneum. Tribolium Genome Sequencing Consortium, et al. Nature, 2008 Apr 24. PMID 18362917

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription coregulator binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    C-terminal-binding protein
    Names
    AUGUSTUS-3.0.2_12453
    C-terminal-binding protein-like Protein
    GLEAN_12453

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_031307605.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference icTriCast1.1 Primary Assembly

    Genomic

    1. NC_087395.1 Reference icTriCast1.1 Primary Assembly

      Range
      17856044..17868214
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008199638.3 → XP_008197860.1  C-terminal-binding protein isoform X3

      UniProtKB/TrEMBL
      D6X2E0
      Conserved Domains (1) summary
      cd05299
      Location:29 → 347
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    2. XM_064355115.1 → XP_064211185.1  C-terminal-binding protein isoform X4

      UniProtKB/TrEMBL
      D6X2E0

    3. XM_008199637.3 → XP_008197859.1  C-terminal-binding protein isoform X1

      UniProtKB/TrEMBL
      D6X2E0
      Conserved Domains (1) summary
      cd05299
      Location:29 → 347
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

    4. XM_967148.5 → XP_972241.1  C-terminal-binding protein isoform X2

      See identical proteins and their annotated locations for XP_972241.1

      UniProtKB/TrEMBL
      D6X2E0
      Conserved Domains (1) summary
      cd05299
      Location:29 → 347
      CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
    Nucleotide Protein Strain
    Heading Accession and Version

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