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    LOC6553988 kynurenine--oxoglutarate transaminase 3 [ Drosophila erecta ]

    Gene ID: 6553988, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6553988
    Gene description
    kynurenine--oxoglutarate transaminase 3
    Locus tag
    Dere_GG17186
    See related
    EnsemblRapid:LOC6553988
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila erecta
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GG17186; GG17186-PA; GG17186-PB
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6553988 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current DereRS2 (GCF_003286155.1) Unplaced Scaffold NW_020825194.1 (14547435..14549580, complement)

    NW_020825194.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein H3 Neighboring gene trophoblast glycoprotein Neighboring gene Cytochrome c oxidase subunit 5A Neighboring gene sphingomyelin phosphodiesterase 4 Neighboring gene Cytochrome P450 family protein sad

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020825194 Unplaced Scaffold Reference DereRS2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables kynurenine-oxoglutarate transaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    kynurenine--oxoglutarate transaminase 3
    Names
    Dere\GG17186
    Dere\GG17186-PA
    Dere\GG17186-PB
    dere_GLEANR_2095

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila erecta Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DereRS2

    Genomic

    1. NW_020825194.1 Reference DereRS2

      Range
      14547435..14549580 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015154410.2 → XP_015009896.1  kynurenine--oxoglutarate transaminase 3

      UniProtKB/TrEMBL
      B3P4E6
      Related
      XP_015009896.1, XM_015154410.2
      Conserved Domains (2) summary
      cd00609
      Location:64 → 448
      AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
      PRK08912
      Location:56 → 449
      PRK08912; hypothetical protein; Provisional

    2. XM_001980467.3 → XP_001980503.1  kynurenine--oxoglutarate transaminase 3

      See identical proteins and their annotated locations for XP_001980503.1

      UniProtKB/TrEMBL
      B3P4E6
      Related
      XP_001980503.1, XM_001980467.3
      Conserved Domains (2) summary
      cd00609
      Location:64 → 448
      AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
      PRK08912
      Location:56 → 449
      PRK08912; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials