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    EDB93DRAFT_1100991 small GTPase CDC42 [ Suillus bovinus ]

    Gene ID: 64709449, updated on 25-Jan-2024

    Summary

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    Gene symbol
    EDB93DRAFT_1100991
    Gene description
    small GTPase CDC42
    Locus tag
    EDB93DRAFT_1100991
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Suillus bovinus (strain: UH-Sbo-P2)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Boletales; Suillineae; Suillaceae; Suillus
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    Genomic context

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    See EDB93DRAFT_1100991 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    5

    NW_024542063.1Genomic Context describing neighboring genes Neighboring gene GTPase Neighboring gene uncharacterized protein Neighboring gene WD40-repeat-containing domain protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024542063.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics reveals dynamic genome evolution in host specialist ectomycorrhizal fungi. Lofgren LA, et al. New Phytol, 2021 Apr. PMID 33355923, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in small GTPase-mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    small GTPase CDC42

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_024542063.1 Reference assembly

      Range
      207844..208657 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041447057.1 → XP_041311384.1  small GTPase CDC42 [Suillus bovinus]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q9P8M9
      Conserved Domains (1) summary
      cd01874
      Location:3 → 177
      Cdc42; cell division cycle 42 (Cdc42) is a small GTPase of the Rho family
    Nucleotide Protein
    Heading Accession and Version

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