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    SPBR_01613 translation initiation factor 4A [ Sporothrix brasiliensis 5110 ]

    Gene ID: 63674844, updated on 17-May-2024

    Summary

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    Gene symbol
    SPBR_01613
    Gene description
    translation initiation factor 4A
    Locus tag
    SPBR_01613
    See related
    FungiDB:SPBR_01613; VEuPathDB:SPBR_01613
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Sporothrix brasiliensis 5110 (strain: 5110, nat-host: Felis catus, culture-collection: ATCC:MYA-4823)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Ophiostomatales; Ophiostomataceae; Sporothrix
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    Genomic context

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    See SPBR_01613 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_024467137.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene RNA-binding protein Neighboring gene f-box and wd domain containing protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024467137.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics of the major fungal agents of human and animal Sporotrichosis: Sporothrix schenckii and Sporothrix brasiliensis. Teixeira MM, et al. BMC Genomics, 2014 Oct 29. PMID 25351875, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA helicase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    translation initiation factor 4A
    XP_040619798.1
    • identified by sequence similarity

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_024467137.1 Reference assembly

      Range
      3018980..3020591 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040759923.1 → XP_040619798.1  translation initiation factor 4A [Sporothrix brasiliensis 5110]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0C2FL35
      Conserved Domains (1) summary
      PTZ00424
      Location:1 → 397
      PTZ00424; helicase 45; Provisional
    Nucleotide Protein
    Heading Accession and Version

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