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    FE838_RS10410 hybrid sensor histidine kinase/response regulator transcription factor [ Bacteroides thetaiotaomicron ]

    Gene ID: 60925356, updated on 24-Oct-2024

    Summary

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    Gene symbol
    FE838_RS10410
    Gene description
    hybrid sensor histidine kinase/response regulator transcription factor
    Locus tag
    FE838_RS10410
    Gene type
    protein coding
    Organism
    Bacteroides thetaiotaomicron (strain: DSM 2079, nat-host: Homo sapiens, culture-collection: DSM:2079, type-material: type strain of Bacteroides thetaiotaomicron)
    Lineage
    Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
    Old locus tag
    FE838_10860
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    Genomic context

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    NZ_CP040530.1Genomic Context describing neighboring genes Neighboring gene sialate O-acetylesterase Neighboring gene sugar-binding domain-containing protein Neighboring gene right-handed parallel beta-helix repeat-containing protein Neighboring gene HAD family hydrolase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP040530.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Diversity of structure and function of response regulator output domains. Galperin MY. Curr Opin Microbiol, 2010 Apr. PMID 20226724, Free PMC Article
    2. GHKL, an emergent ATPase/kinase superfamily. Dutta R, et al. Trends Biochem Sci, 2000 Jan. PMID 10637609
    3. Signal transduction: Gyrating protein kinases. Stock J. Curr Biol, 1999 May 20. PMID 10339418
    4. The many faces of the helix-turn-helix domain: transcription regulation and beyond. Aravind L, et al. FEMS Microbiol Rev, 2005 Apr. PMID 15808743

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    hybrid sensor histidine kinase/response regulator transcription factor
    WP_011109156.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP040530.1 Reference assembly

      Range
      2812760..2817055 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011109156.1 hybrid sensor histidine kinase/response regulator transcription factor [Bacteroides thetaiotaomicron]

      See identical proteins and their annotated locations for WP_011109156.1

      UniProtKB/TrEMBL
      A0A1H7LAQ1, A0A943HNG9, Q8A039
      Conserved Domains (5) summary
      smart00342
      Location:1332 → 1415
      HTH_ARAC; helix_turn_helix, arabinose operon control protein
      COG0642
      Location:881 → 1121
      BaeS; Signal transduction histidine kinase [Signal transduction mechanisms]
      COG3292
      Location:384 → 728
      COG3292; Periplasmic ligand-binding sensor domain [Signal transduction mechanisms]
      cd17574
      Location:1173 → 1272
      REC_OmpR; phosphoacceptor receiver (REC) domain of OmpR family response regulators
      pfam07495
      Location:796 → 854
      Y_Y_Y; Y_Y_Y domain
    Nucleotide Protein
    Heading Accession and Version

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