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    AO090003001134 hypothetical protein [ Aspergillus oryzae RIB40 ]

    Gene ID: 5992212, updated on 17-May-2024

    Summary

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    Gene symbol
    AO090003001134
    Gene description
    hypothetical protein
    Locus tag
    AO090003001134
    See related
    FungiDB:AO090003001134; VEuPathDB:AO090003001134
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Aspergillus oryzae RIB40 (strain: RIB40)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Aspergillus; Aspergillus subgen. Circumdati
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    Genomic context

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    See AO090003001134 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Sequence:
    Chromosome: 2; NC_036436.1 (5195196..5199510, complement)

    Chromosome 2 - NC_036436.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S6 Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_036436.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequencing and analysis of Aspergillus oryzae. Machida M, et al. Nature, 2005 Dec 22. PMID 16372010

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin-protein transferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein
    XP_023090232.1
    • E3 ubiquitin-protein ligase/Putative upstream regulatory element binding protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_036436.1 Reference assembly

      Range
      5195196..5199510 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023235192.1 → XP_023090232.1  unnamed protein product [Aspergillus oryzae RIB40]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      I8A6Q7, Q2UJP0
      Conserved Domains (2) summary
      COG5021
      Location:879 → 1358
      HUL4; Ubiquitin-protein ligase [Posttranslational modification, protein turnover, chaperones]
      pfam14377
      Location:293 → 400
      DUF4414; Domain of unknown function (DUF4414)
    Nucleotide Protein
    Heading Accession and Version

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