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    SNOG_11148 hypothetical protein [ Parastagonospora nodorum SN15 ]

    Gene ID: 5978305, updated on 16-Nov-2023

    Summary

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    Gene symbol
    SNOG_11148
    Gene description
    hypothetical protein
    Locus tag
    SNOG_11148
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Parastagonospora nodorum SN15 (strain: SN15)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Phaeosphaeriaceae; Parastagonospora
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    Genomic context

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    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_001884566.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_001884566.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    • gene prediction version 2

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of catalytic step 2 spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein
    XP_001801397.1
    • gene prediction version 2

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001884566.1 Reference assembly

      Range
      649886..650964 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001801345.1 → XP_001801397.1  hypothetical protein SNOG_11148 [Parastagonospora nodorum SN15]

      See identical proteins and their annotated locations for XP_001801397.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A7U2FKY0, Q0UAR6
      Conserved Domains (3) summary
      COG2319
      Location:6 → 279
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:77 → 114
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:8 → 328
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials