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    CTRU02_12818 DUF543 domain protein [ Colletotrichum truncatum ]

    Gene ID: 59366037, updated on 30-Nov-2023

    Summary

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    Gene symbol
    CTRU02_12818
    Gene description
    DUF543 domain protein
    Locus tag
    CTRU02_12818
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Colletotrichum truncatum (strain: CMES1059, nat-host: Glycine max)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Glomerellaceae; Colletotrichum; Colletotrichum truncatum species complex
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    Genomic context

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    See CTRU02_12818 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_023503081.1Genomic Context describing neighboring genes Neighboring gene short-chain dehydrogenase Neighboring gene urb2 npa2 family protein Neighboring gene iron-sulfur cluster assembly accessory protein Neighboring gene 60S ribosomal protein L7

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023503081.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome Sequence Resources of Colletotrichum truncatum, C. plurivorum, C. musicola, and C. sojae: Four Species Pathogenic to Soybean (Glycine max). Rogério F, et al. Phytopathology, 2020 Sep. PMID 32352862
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    part_of MICOS complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DUF543 domain protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_023503081.1 Reference assembly

      Range
      34834..35422
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_036731054.1 → XP_036577139.1  DUF543 domain protein, partial [Colletotrichum truncatum]

      Status: PROVISIONAL

      Conserved Domains (1) summary
      pfam04418
      Location:74 → 145
      DUF543; Domain of unknown function (DUF543)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases