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    WL90_RS30880 autoinducer binding domain-containing protein [ Burkholderia cenocepacia ]

    Gene ID: 56562582, updated on 7-Mar-2024

    Summary

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    Gene symbol
    WL90_RS30880
    Gene description
    autoinducer binding domain-containing protein
    Locus tag
    WL90_RS30880
    Gene type
    protein coding
    Organism
    Burkholderia cenocepacia (strain: MSMB384WGS)
    Lineage
    Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
    Old locus tag
    WL90_30860
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    Genomic context

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    Location:
    chromosome: 2

    2 - NZ_CP013452.1Genomic Context describing neighboring genes Neighboring gene type III secretion system inner membrane ring subunit SctD Neighboring gene type III secretion system outer membrane ring subunit SctC Neighboring gene type III secretion system export apparatus subunit SctS Neighboring gene type III secretion system export apparatus subunit SctV Neighboring gene LuxR family transcriptional regulator Neighboring gene Nramp family divalent metal transporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP013452.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A putative type III secretion gene cluster is widely distributed in the Burkholderia cepacia complex but absent from genomovar I. Parsons YN, et al. FEMS Microbiol Lett, 2001 Sep 11. PMID 11557147

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    autoinducer binding domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP013452.1 Reference assembly

      Range
      2143139..2143972 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_006487859.1 MULTISPECIES: autoinducer binding domain-containing protein [Burkholderia]

      See identical proteins and their annotated locations for WP_006487859.1

      UniProtKB/TrEMBL
      A0A364H3Y1, Q8VP24
      Conserved Domains (2) summary
      COG2197
      Location:196 → 274
      CitB; DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains [Signal transduction mechanisms, Transcription]
      pfam03472
      Location:53 → 199
      Autoind_bind; Autoinducer binding domain
    Nucleotide Protein
    Heading Accession and Version

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