hs3st3b1b heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1b [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: hs3st3b1bprovided by ZNC
Official Full Name: heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1bprovided by ZNC
Primary source: ZFIN:ZDB-GENE-070202-5
See related: Ensembl:ENSDARG00000086645 AllianceGenome:ZFIN:ZDB-GENE-070202-5
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary: Predicted to enable [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity. Predicted to be located in membrane. Is expressed in several structures, including fin; forebrain neural rod; nervous system; pectoral fin bud; and polster. Orthologous to human HS3ST3B1 (heparan sulfate-glucosamine 3-sulfotransferase 3B1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 12

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	12	NC_007123.7 (36971983..37002188)
105	previous assembly	GRCz10 (GCF_000002035.5)	12	NC_007123.6 (36797241..36827446)

Chromosome 12 - NC_007123.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

fc26d08.x1 (e-PCR)
- UniSTS:193307

AI721864 (e-PCR)
- UniSTS:206042

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity	IBA Inferred from Biological aspect of Ancestor more info
enables sulfotransferase activity	IEA Inferred from Electronic Annotation more info
enables transferase activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: heparan sulfate glucosamine 3-O-sulfotransferase 3B1b

Names: 3-ost-3z; zf3-ost-3z

NP_001074037.1

EC 2.8.2.30

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.