U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    SS1G_05865 hypothetical protein [ Sclerotinia sclerotiorum 1980 UF-70 ]

    Gene ID: 5489415, updated on 16-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    SS1G_05865
    Gene description
    hypothetical protein
    Locus tag
    SS1G_05865
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Sclerotinia sclerotiorum 1980 UF-70 (strain: 1980)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes; Helotiales; Sclerotiniaceae; Sclerotinia
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SS1G_05865 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_001820829.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_001820829.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea. Amselem J, et al. PLoS Genet, 2011 Aug. PMID 21876677, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tRNA dihydrouridine synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_001820829.1 Reference assembly

      Range
      721852..724254
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001592893.1 → XP_001592943.1  hypothetical protein SS1G_05865 [Sclerotinia sclerotiorum 1980 UF-70]

      See identical proteins and their annotated locations for XP_001592943.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      A7EKL8
      UniProtKB/TrEMBL
      A0A1D9Q4L3
      Conserved Domains (2) summary
      COG0042
      Location:340 → 679
      DusA; tRNA-dihydrouridine synthase [Translation, ribosomal structure and biogenesis]
      cd02801
      Location:340 → 633
      DUS_like_FMN; Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A7EKL8.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials