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    tmem167a transmembrane protein 167A [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 548921, updated on 4-Nov-2024

    Summary

    Official Symbol
    tmem167aprovided by Xenbase
    Official Full Name
    transmembrane protein 167Aprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-943966
    See related
    Ensembl:ENSXETG00000027813 AllianceGenome:Xenbase:XB-GENE-943966
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    kish-a; tmem167
    Summary
    Predicted to be involved in intracellular transport and protein secretion. Predicted to be located in Golgi membrane. Orthologous to human TMEM167A (transmembrane protein 167A). [provided by Alliance of Genome Resources, Nov 2024]
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    NEW
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    Genomic context

    See tmem167a in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 1 NC_030677.2 (181267389..181273719)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (168489499..168495829, complement)

    Chromosome 1 - NC_030677.2Genomic Context describing neighboring genes Neighboring gene versican Neighboring gene uncharacterized LOC105945407 Neighboring gene X-ray repair complementing defective repair in Chinese hamster cells 4 Neighboring gene uncharacterized LOC108645628 Neighboring gene ATPase, H+ transporting, lysosomal accessory protein 1-like

    Genomic regions, transcripts, and products

    General gene information

    Gene Ontology Provided by Xenbase

    Process Evidence Code Pubs
    involved_in intracellular transport IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein secretion IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
     
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    protein kish-A
    Names
    transmembrane protein 167
    NP_001016167.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001016167.2NP_001016167.1  protein kish-A precursor

      See identical proteins and their annotated locations for NP_001016167.1

      Status: PROVISIONAL

      Source sequence(s)
      CR761906
      UniProtKB/Swiss-Prot
      A4QND4, Q28FL7
      Related
      ENSXETP00000057858.2, ENSXETT00000057858.4
      Conserved Domains (1) summary
      pfam06842
      Location:1944
      DUF1242; Protein of unknown function (DUF1242)

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030677.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      181267389..181273719
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)