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    RPT2 ATPase of 26S proteasome regulatory subunit 4 [ Lodderomyces elongisporus ]

    Gene ID: 5233906, updated on 1-Feb-2024

    Summary

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    Gene symbol
    RPT2
    Gene description
    ATPase of 26S proteasome regulatory subunit 4
    Locus tag
    PVL30_002305
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Lodderomyces elongisporus (strain: NRRL YB-4239, culture-collection: ATCC:11503, culture-collection: NRRL:YB-4239, type-material: culture from holotype of Saccharomyces elongisporus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Candida/Lodderomyces clade; Lodderomyces
    Old locus tag
    LELG_02293
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    Genomic context

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    See RPT2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_083674.1 (2741256..2742578)

    Chromosome 2 - NC_083674.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_083674.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables proteasome-activating activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proteasome regulatory particle, base subcomplex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ATPase of 26S proteasome regulatory subunit 4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_083674.1 Reference assembly

      Range
      2741256..2742578
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001527414.1 → XP_001527464.2  ATPase of 26S proteasome regulatory subunit 4 [Lodderomyces elongisporus]

      Status: PROVISIONAL

    Nucleotide Protein
    Heading Accession and Version

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