NLRP9 NLR family pyrin domain containing 9 [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: NLRP9provided by VGNC
Official Full Name: NLR family pyrin domain containing 9provided by VGNC
Primary source: VGNC:VGNC:32121
See related: BGD:BT10471; Ensembl:ENSBTAG00000004725
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as: NALP9
Orthologs: human all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 18

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	18	NC_037345.1 (61771669..61796493, complement)

Chromosome 18 - NC_037345.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:: NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

The structure of NLRP9 reveals a unique C-terminal region with putative regulatory function.
Title: The structure of NLRP9 reveals a unique C-terminal region with putative regulatory function.
Assignment to a QTL region for reproductive traits and preferential expression of NALP9, NALP8, and NALP5 in oocyte, germinal lineage, and gonad cells may suggest their functional relevance to reproduction and possible contribution to phenotypic variation
Title: Bovine NALP5, NALP8, and NALP9 genes: assignment to a QTL region and the expression in adult tissues, oocytes, and preimplantation embryos.
novel oocyte marker gene in cattle
Title: Bovine mater-like NALP9 is an oocyte marker gene.

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in regulation of inflammatory response	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: NACHT, LRR and PYD domains-containing protein 9

Names: NACHT, leucine rich repeat and PYD containing 9

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001024664.1 → NP_001019835.1 NACHT, LRR and PYD domains-containing protein 9

See identical proteins and their annotated locations for NP_001019835.1

Status: PROVISIONAL

Source sequence(s)

DQ011673

UniProtKB/TrEMBL

F1MKL3

Related

ENSBTAP00000006201.4, ENSBTAT00000006201.6

Conserved Domains (5) summary

smart00382
Location:148 → 237

AAA; ATPases associated with a variety of cellular activities

cd00116
Location:682 → 954

LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

cd08320
Location:11 → 93

Pyrin_NALPs; Pyrin death domain found in NALP proteins

sd00033
Location:692 → 720

LRR_RI; leucine-rich repeat [structural motif]

pfam05729
Location:151 → 315

NACHT; NACHT domain