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    LRRC51 leucine rich repeat containing 51 [ Bos taurus (domestic cattle) ]

    Gene ID: 515066, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LRRC51
    Gene description
    leucine rich repeat containing 51
    See related
    BGD:BT24729; Ensembl:ENSBTAG00000017964
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See LRRC51 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 15 NC_037342.1 (51714503..51729486)

    Chromosome 15 - NC_037342.1Genomic Context describing neighboring genes Neighboring gene interleukin 18 binding protein Neighboring gene nuclear mitotic apparatus protein 1 Neighboring gene late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 Neighboring gene transmembrane O-methyltransferase Neighboring gene anaphase promoting complex subunit 15

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037342.1 Chromosome 15 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC134313

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat-containing protein 51
    NP_001019716.1
    NP_001268967.1
    NP_001268968.1
    XP_059730675.1
    XP_059730676.1
    XP_059730677.1
    XP_059730678.1
    XP_059730679.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001024545.1 → NP_001019716.1  leucine-rich repeat-containing protein 51

      See identical proteins and their annotated locations for NP_001019716.1

      Status: PROVISIONAL

      Description
      Transcript Variant: This variant (1) and variants 2 and 3 encode the same protein.
      Source sequence(s)
      BT020631
      UniProtKB/Swiss-Prot
      Q5EAD8
      UniProtKB/TrEMBL
      A0AAA9RWX0
      Related
      ENSBTAP00000077966.1, ENSBTAT00000128538.1
      Conserved Domains (3) summary
      sd00033
      Location:52 → 80
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:103 → 141
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    2. NM_001282038.1 → NP_001268967.1  leucine-rich repeat-containing protein 51

      See identical proteins and their annotated locations for NP_001268967.1

      Status: PROVISIONAL

      Description
      Transcript Variant: This variant (2) has an alternate 5' UTR exon, compared to variant 1. Variants 1, 2 and 3 encode the same protein.
      Source sequence(s)
      BT020631, EE348175
      UniProtKB/Swiss-Prot
      Q5EAD8
      UniProtKB/TrEMBL
      A0AAA9RWX0
      Conserved Domains (3) summary
      sd00033
      Location:52 → 80
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:103 → 141
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    3. NM_001282039.1 → NP_001268968.1  leucine-rich repeat-containing protein 51

      See identical proteins and their annotated locations for NP_001268968.1

      Status: PROVISIONAL

      Description
      Transcript Variant: This variant (3) has an alternate 5' UTR exon, compared to variant 1. Variants 1, 2 and 3 encode the same protein.
      Source sequence(s)
      BC109501, BT020631
      UniProtKB/Swiss-Prot
      Q5EAD8
      UniProtKB/TrEMBL
      A0AAA9RWX0
      Conserved Domains (3) summary
      sd00033
      Location:52 → 80
      LRR_RI; leucine-rich repeat [structural motif]
      pfam12799
      Location:103 → 141
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:80 → 139
      LRR_8; Leucine rich repeat

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037342.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      51714503..51729486
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059874695.1 → XP_059730678.1  leucine-rich repeat-containing protein 51 isoform X2

      UniProtKB/TrEMBL
      A0AAA9TFX8

    2. XM_059874692.1 → XP_059730675.1  leucine-rich repeat-containing protein 51 isoform X1

      UniProtKB/Swiss-Prot
      Q5EAD8

    3. XM_059874694.1 → XP_059730677.1  leucine-rich repeat-containing protein 51 isoform X2

      UniProtKB/TrEMBL
      A0AAA9TFX8

    4. XM_059874693.1 → XP_059730676.1  leucine-rich repeat-containing protein 51 isoform X2

      UniProtKB/TrEMBL
      A0AAA9TFX8
      Related
      ENSBTAP00000097074.1, ENSBTAT00000118370.1

    5. XM_059874696.1 → XP_059730679.1  leucine-rich repeat-containing protein 51 isoform X3

      UniProtKB/TrEMBL
      A0AAF6Z4K8
      Related
      ENSBTAP00000023886.3, ENSBTAT00000023886.4
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5EAD8.1 GenPept UniProtKB/Swiss-Prot:Q5EAD8

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials