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    SLC7A3 solute carrier family 7 member 3 [ Canis lupus familiaris (dog) ]

    Gene ID: 491945, updated on 5-Mar-2024

    Summary

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    Gene symbol
    SLC7A3
    Gene description
    solute carrier family 7 member 3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See SLC7A3 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (56251502..56375048, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (46109853..46233444, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (55478334..55601870, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (54219879..54343367, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (55551479..55674950, complement)

    Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene testis expressed 11 Neighboring gene U6 spliceosomal RNA Neighboring gene ribosomal protein L34 pseudogene Neighboring gene U6 spliceosomal RNA Neighboring gene sorting nexin 12 Neighboring gene forkhead box O4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables amino acid transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in amino acid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cationic amino acid transporter 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051843.1 Reference ROS_Cfam_1.0

      Range
      56251502..56375048 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038450233.1 → XP_038306161.1  cationic amino acid transporter 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L6U8, A0A8C0TR38, A0A8P0NI56
      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 589
      2A0303; cationic amino acid transport permease

    2. XM_038450232.1 → XP_038306160.1  cationic amino acid transporter 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L6U8, A0A8C0TR38, A0A8P0NI56
      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 589
      2A0303; cationic amino acid transport permease

    3. XM_038450234.1 → XP_038306162.1  cationic amino acid transporter 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L6U8, A0A8C0TR38, A0A8P0NI56
      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 589
      2A0303; cationic amino acid transport permease

    4. XM_038450236.1 → XP_038306164.1  cationic amino acid transporter 3 isoform X3

      UniProtKB/TrEMBL
      A0A8C0TR38
      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 514
      2A0303; cationic amino acid transport permease

    5. XM_038450235.1 → XP_038306163.1  cationic amino acid transporter 3 isoform X2

      UniProtKB/TrEMBL
      A0A8C0TR38
      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 536
      2A0303; cationic amino acid transport permease

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049299.1 Alternate UMICH_Zoey_3.1

      Range
      54219879..54343367 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038523680.1 → XP_038379608.1  cationic amino acid transporter 3 isoform X1

      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 589
      2A0303; cationic amino acid transport permease

    2. XM_038523678.1 → XP_038379606.1  cationic amino acid transporter 3 isoform X1

      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 589
      2A0303; cationic amino acid transport permease

    3. XM_038523681.1 → XP_038379609.1  cationic amino acid transporter 3 isoform X1

      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 589
      2A0303; cationic amino acid transport permease

    4. XM_038523683.1 → XP_038379611.1  cationic amino acid transporter 3 isoform X3

      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 514
      2A0303; cationic amino acid transport permease

    5. XM_038523682.1 → XP_038379610.1  cationic amino acid transporter 3 isoform X2

      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 536
      2A0303; cationic amino acid transport permease

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

      Range
      55551479..55674950 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038652171.1 → XP_038508099.1  cationic amino acid transporter 3 isoform X1

      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 589
      2A0303; cationic amino acid transport permease

    2. XM_038652170.1 → XP_038508098.1  cationic amino acid transporter 3 isoform X1

      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 589
      2A0303; cationic amino acid transport permease

    3. XM_038652172.1 → XP_038508100.1  cationic amino acid transporter 3 isoform X1

      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 589
      2A0303; cationic amino acid transport permease

    4. XM_038652174.1 → XP_038508102.1  cationic amino acid transporter 3 isoform X3

      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 514
      2A0303; cationic amino acid transport permease

    5. XM_038652173.1 → XP_038508101.1  cationic amino acid transporter 3 isoform X2

      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 536
      2A0303; cationic amino acid transport permease

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

      Range
      55478334..55601870 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038587648.1 → XP_038443576.1  cationic amino acid transporter 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L6U8, A0A8C0TR38, A0A8P0NI56
      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 589
      2A0303; cationic amino acid transport permease

    2. XM_038587647.1 → XP_038443575.1  cationic amino acid transporter 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L6U8, A0A8C0TR38, A0A8P0NI56
      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 589
      2A0303; cationic amino acid transport permease

    3. XM_038587649.1 → XP_038443577.1  cationic amino acid transporter 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L6U8, A0A8C0TR38, A0A8P0NI56
      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 589
      2A0303; cationic amino acid transport permease

    4. XM_038587651.1 → XP_038443579.1  cationic amino acid transporter 3 isoform X3

      UniProtKB/TrEMBL
      A0A8C0TR38
      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 514
      2A0303; cationic amino acid transport permease

    5. XM_038587650.1 → XP_038443578.1  cationic amino acid transporter 3 isoform X2

      UniProtKB/TrEMBL
      A0A8C0TR38
      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 536
      2A0303; cationic amino acid transport permease

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      46109853..46233444 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038464891.1 → XP_038320819.1  cationic amino acid transporter 3 isoform X1

      UniProtKB/TrEMBL
      A0A8C0L6U8, A0A8C0TR38, A0A8P0NI56
      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 589
      2A0303; cationic amino acid transport permease

    2. XM_549065.6 → XP_549065.2  cationic amino acid transporter 3 isoform X1

      See identical proteins and their annotated locations for XP_549065.2

      UniProtKB/TrEMBL
      A0A8C0L6U8, A0A8C0TR38, A0A8P0NI56
      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 589
      2A0303; cationic amino acid transport permease

    3. XM_005641454.4 → XP_005641511.1  cationic amino acid transporter 3 isoform X1

      See identical proteins and their annotated locations for XP_005641511.1

      UniProtKB/TrEMBL
      A0A8C0L6U8, A0A8C0TR38, A0A8P0NI56
      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 589
      2A0303; cationic amino acid transport permease

    4. XM_005641455.4 → XP_005641512.1  cationic amino acid transporter 3 isoform X3

      UniProtKB/TrEMBL
      A0A8C0TR38
      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 514
      2A0303; cationic amino acid transport permease

    5. XM_038464892.1 → XP_038320820.1  cationic amino acid transporter 3 isoform X2

      UniProtKB/TrEMBL
      A0A8C0TR38
      Conserved Domains (1) summary
      TIGR00906
      Location:4 → 536
      2A0303; cationic amino acid transport permease
    Nucleotide Protein
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