PNPLA4 patatin like phospholipase domain containing 4 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: PNPLA4provided by VGNC
Official Full Name: patatin like phospholipase domain containing 4provided by VGNC
Primary source: VGNC:VGNC:54182
See related: Ensembl:ENSCAFG00845024459
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human all
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Genomic context

Location:: chromosome: X

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	X	NC_051843.1 (4756066..4863806, complement)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	X	NC_006621.4 (4772912..4880400, complement)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	X	NC_049260.1 (4784271..4891905, complement)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	X	NC_049299.1 (4754281..4861779, complement)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	X	NC_049780.1 (4785776..4893459, complement)

Chromosome X - NC_051843.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables retinyl-palmitate esterase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables triacylglycerol lipase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in lipid homeostasis	IEA Inferred from Electronic Annotation more info	PubMed
involved_in triglyceride catabolic process	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed
located_in lipid droplet	IEA Inferred from Electronic Annotation more info	PubMed
located_in membrane	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: patatin-like phospholipase domain-containing protein 4

XP_013966992.1

EC 3.1.1.3

XP_022271613.1

EC 3.1.1.3

XP_038305281.1

EC 3.1.1.3

XP_038305282.1

EC 3.1.1.3

XP_038305283.1

EC 3.1.1.3

XP_038305284.1

EC 3.1.1.3

XP_038305285.1

EC 3.1.1.3

XP_038305286.1

EC 3.1.1.3

XP_038305287.1

EC 3.1.1.3

XP_038320851.1

EC 3.1.1.3

XP_038320852.1

EC 3.1.1.3

XP_038320853.1

EC 3.1.1.3

XP_038320854.1

EC 3.1.1.3

XP_038378701.1

EC 3.1.1.3

XP_038378702.1

EC 3.1.1.3

XP_038378703.1

EC 3.1.1.3

XP_038378704.1

EC 3.1.1.3

XP_038378705.1

EC 3.1.1.3

XP_038378706.1

EC 3.1.1.3

XP_038378707.1

EC 3.1.1.3

XP_038442701.1

EC 3.1.1.3

XP_038442703.1

EC 3.1.1.3

XP_038442704.1

EC 3.1.1.3

XP_038442705.1

EC 3.1.1.3

XP_038442706.1

EC 3.1.1.3

XP_038442707.1

EC 3.1.1.3

XP_038442708.1

EC 3.1.1.3

XP_038507210.1

EC 3.1.1.3

XP_038507211.1

EC 3.1.1.3

XP_038507212.1

EC 3.1.1.3

XP_038507213.1

EC 3.1.1.3

XP_038507214.1

EC 3.1.1.3

XP_038507215.1

EC 3.1.1.3

XP_038507216.1

EC 3.1.1.3

XP_548849.4

EC 3.1.1.3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051843.1 Reference ROS_Cfam_1.0

Range

4756066..4863806 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038449358.1 → XP_038305286.1 patatin-like phospholipase domain-containing protein 4 isoform X4

UniProtKB/TrEMBL

A0A8I3PML4

Conserved Domains (1) summary

cd07222
Location:15 → 230

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038449356.1 → XP_038305284.1 patatin-like phospholipase domain-containing protein 4 isoform X3

UniProtKB/TrEMBL

A0A8I3PWI7, A0A8I3PWK9

Related

ENSCAFP00845033998.1, ENSCAFT00845043395.1

Conserved Domains (1) summary

cd07222
Location:5 → 253

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038449353.1 → XP_038305281.1 patatin-like phospholipase domain-containing protein 4 isoform X1

UniProtKB/TrEMBL

A0A8I3PWK9

Conserved Domains (1) summary

cd07222
Location:15 → 263

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038449354.1 → XP_038305282.1 patatin-like phospholipase domain-containing protein 4 isoform X2

UniProtKB/TrEMBL

A0A8C0JP31, A0A8C0SJA3, A0A8I3PWK9

Related

ENSCAFP00845033934.1, ENSCAFT00845043298.1

Conserved Domains (1) summary

cd07222
Location:15 → 260

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038449357.1 → XP_038305285.1 patatin-like phospholipase domain-containing protein 4 isoform X3

UniProtKB/TrEMBL

A0A8I3PWI7, A0A8I3PWK9

Related

ENSCAFP00845034058.1, ENSCAFT00845043474.1

Conserved Domains (1) summary

cd07222
Location:5 → 253

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038449355.1 → XP_038305283.1 patatin-like phospholipase domain-containing protein 4 isoform X3

UniProtKB/TrEMBL

A0A8I3PWI7, A0A8I3PWK9

Conserved Domains (1) summary

cd07222
Location:5 → 253

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038449359.1 → XP_038305287.1 patatin-like phospholipase domain-containing protein 4 isoform X5

UniProtKB/TrEMBL

A0A8I3PWK9

Conserved Domains (1) summary

cd07222
Location:1 → 212

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

Alternate UMICH_Zoey_3.1

Genomic

NC_049299.1 Alternate UMICH_Zoey_3.1

Range

4754281..4861779 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038522778.1 → XP_038378706.1 patatin-like phospholipase domain-containing protein 4 isoform X4

Conserved Domains (1) summary

cd07222
Location:15 → 230

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038522776.1 → XP_038378704.1 patatin-like phospholipase domain-containing protein 4 isoform X3

Conserved Domains (1) summary

cd07222
Location:5 → 253

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038522773.1 → XP_038378701.1 patatin-like phospholipase domain-containing protein 4 isoform X1

Conserved Domains (1) summary

cd07222
Location:15 → 263

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038522774.1 → XP_038378702.1 patatin-like phospholipase domain-containing protein 4 isoform X2

Conserved Domains (1) summary

cd07222
Location:15 → 260

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038522777.1 → XP_038378705.1 patatin-like phospholipase domain-containing protein 4 isoform X3

Conserved Domains (1) summary

cd07222
Location:5 → 253

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038522775.1 → XP_038378703.1 patatin-like phospholipase domain-containing protein 4 isoform X3

Conserved Domains (1) summary

cd07222
Location:5 → 253

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038522779.1 → XP_038378707.1 patatin-like phospholipase domain-containing protein 4 isoform X5

Conserved Domains (1) summary

cd07222
Location:1 → 212

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049780.1 Alternate UNSW_CanFamBas_1.0

Range

4785776..4893459 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038651287.1 → XP_038507215.1 patatin-like phospholipase domain-containing protein 4 isoform X4

Conserved Domains (1) summary

cd07222
Location:15 → 230

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038651285.1 → XP_038507213.1 patatin-like phospholipase domain-containing protein 4 isoform X3

Conserved Domains (1) summary

cd07222
Location:5 → 253

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038651282.1 → XP_038507210.1 patatin-like phospholipase domain-containing protein 4 isoform X1

Conserved Domains (1) summary

cd07222
Location:15 → 263

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038651283.1 → XP_038507211.1 patatin-like phospholipase domain-containing protein 4 isoform X2

Conserved Domains (1) summary

cd07222
Location:15 → 260

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038651286.1 → XP_038507214.1 patatin-like phospholipase domain-containing protein 4 isoform X3

Conserved Domains (1) summary

cd07222
Location:5 → 253

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038651284.1 → XP_038507212.1 patatin-like phospholipase domain-containing protein 4 isoform X3

Conserved Domains (1) summary

cd07222
Location:5 → 253

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038651288.1 → XP_038507216.1 patatin-like phospholipase domain-containing protein 4 isoform X5

Conserved Domains (1) summary

cd07222
Location:1 → 212

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049260.1 Alternate UU_Cfam_GSD_1.0

Range

4784271..4891905 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038586779.1 → XP_038442707.1 patatin-like phospholipase domain-containing protein 4 isoform X4

UniProtKB/TrEMBL

A0A8I3PML4

Conserved Domains (1) summary

cd07222
Location:15 → 230

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038586777.1 → XP_038442705.1 patatin-like phospholipase domain-containing protein 4 isoform X3

UniProtKB/TrEMBL

A0A8I3PWI7, A0A8I3PWK9

Conserved Domains (1) summary

cd07222
Location:5 → 253

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038586773.1 → XP_038442701.1 patatin-like phospholipase domain-containing protein 4 isoform X1

UniProtKB/TrEMBL

A0A8I3PWK9

Conserved Domains (1) summary

cd07222
Location:15 → 263

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038586775.1 → XP_038442703.1 patatin-like phospholipase domain-containing protein 4 isoform X2

UniProtKB/TrEMBL

A0A8C0JP31, A0A8C0SJA3, A0A8I3PWK9

Conserved Domains (1) summary

cd07222
Location:15 → 260

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038586778.1 → XP_038442706.1 patatin-like phospholipase domain-containing protein 4 isoform X3

UniProtKB/TrEMBL

A0A8I3PWI7, A0A8I3PWK9

Conserved Domains (1) summary

cd07222
Location:5 → 253

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038586776.1 → XP_038442704.1 patatin-like phospholipase domain-containing protein 4 isoform X3

UniProtKB/TrEMBL

A0A8I3PWI7, A0A8I3PWK9

Conserved Domains (1) summary

cd07222
Location:5 → 253

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038586780.1 → XP_038442708.1 patatin-like phospholipase domain-containing protein 4 isoform X5

UniProtKB/TrEMBL

A0A8I3PWK9

Conserved Domains (1) summary

cd07222
Location:1 → 212

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

4772912..4880400 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_022415905.2 → XP_022271613.1 patatin-like phospholipase domain-containing protein 4 isoform X4

UniProtKB/TrEMBL

A0A8I3PML4

Conserved Domains (1) summary

cd07222
Location:15 → 230

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038464924.1 → XP_038320852.1 patatin-like phospholipase domain-containing protein 4 isoform X3

UniProtKB/TrEMBL

A0A8I3PWI7, A0A8I3PWK9

Conserved Domains (1) summary

cd07222
Location:5 → 253

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_014111517.3 → XP_013966992.1 patatin-like phospholipase domain-containing protein 4 isoform X1

UniProtKB/TrEMBL

A0A8I3PWK9

Conserved Domains (1) summary

cd07222
Location:15 → 263

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_548849.7 → XP_548849.4 patatin-like phospholipase domain-containing protein 4 isoform X2

UniProtKB/TrEMBL

A0A8C0JP31, A0A8C0SJA3, A0A8I3PWK9

Conserved Domains (1) summary

cd07222
Location:15 → 260

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038464925.1 → XP_038320853.1 patatin-like phospholipase domain-containing protein 4 isoform X3

UniProtKB/TrEMBL

A0A8I3PWI7, A0A8I3PWK9

Conserved Domains (1) summary

cd07222
Location:5 → 253

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038464923.1 → XP_038320851.1 patatin-like phospholipase domain-containing protein 4 isoform X3

UniProtKB/TrEMBL

A0A8I3PWI7, A0A8I3PWK9

Conserved Domains (1) summary

cd07222
Location:5 → 253

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4
XM_038464926.1 → XP_038320854.1 patatin-like phospholipase domain-containing protein 4 isoform X5

UniProtKB/TrEMBL

A0A8I3PWK9

Conserved Domains (1) summary

cd07222
Location:1 → 212

Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4