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    GAP1.1 general amino acid permease [ Scheffersomyces stipitis CBS 6054 ]

    Gene ID: 4839454, updated on 21-Dec-2023

    Summary

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    Gene symbol
    GAP1.1
    Gene description
    general amino acid permease
    Locus tag
    PICST_32180
    Gene type
    protein coding
    RNA name
    general amino acid permease
    RefSeq status
    PROVISIONAL
    Organism
    Scheffersomyces stipitis CBS 6054 (strain: CBS 6054)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Scheffersomyces
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    Genomic context

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    See GAP1.1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_009045.1 (875498..877162, complement)

    Chromosome 5 - NC_009045.1Genomic Context describing neighboring genes Neighboring gene mitochondrial tryptophanyl-tRNA synthetase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009045.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the lignocellulose-bioconverting and xylose-fermenting yeast Pichia stipitis. Jeffries TW, et al. Nat Biotechnol, 2007 Mar. PMID 17334359
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables amino acid transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in amino acid transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    general amino acid permease
    XP_001385176.1
    • go_component membrane
      go_process transport

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009045.1 Reference assembly

      Range
      875498..877162 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001385139.1 → XP_001385176.1  general amino acid permease [Scheffersomyces stipitis CBS 6054]

      See identical proteins and their annotated locations for XP_001385176.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A3LVM7
      Conserved Domains (1) summary
      COG0833
      Location:5 → 553
      LysP; Amino acid permease [Amino acid transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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