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    TVAGG3_1003770 Chain X 40s Ribosomal Protein S23 [ Trichomonas vaginalis G3 ]

    Gene ID: 4762645, updated on 17-May-2024

    Summary

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    Gene symbol
    TVAGG3_1003770
    Gene description
    Chain X 40s Ribosomal Protein S23
    Locus tag
    TVAGG3_1003770
    See related
    TrichDB:TVAGG3_1003770; VEuPathDB:TVAGG3_1003770
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Trichomonas vaginalis G3 (strain: G3, nat-host: Homo sapiens, culture-collection: ATCC:PRA-98)
    Lineage
    Eukaryota; Metamonada; Parabasalia; Trichomonadida; Trichomonadidae; Trichomonas
    Old locus tag
    TVAG_2v1003770
    NEW
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    Genomic context

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    See TVAGG3_1003770 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_067203.1 (17732664..17733139, complement)

    Chromosome I - NC_067203.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene protein serine/threonine kinase protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067203.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Carlton JM, et al. Science, 2007 Jan 12. PMID 17218520, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    • replaces TrichDB:TVAG_305300

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Chain X 40s Ribosomal Protein S23
    XP_001317004.1
    • eggNOG seed ortholog:5722.XP_001317004.1;replaces TrichDB:TVAG_305300

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_067203.1 Reference assembly

      Range
      17732664..17733139 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001316969.2 → XP_001317004.1  Chain X 40s Ribosomal Protein S23 [Trichomonas vaginalis G3]

      See identical proteins and their annotated locations for XP_001317004.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A2D895
      Conserved Domains (1) summary
      cl00312
      Location:4 → 144
      Ribosomal_S12_like; Ribosomal protein S12-like family; composed of prokaryotic 30S ribosomal protein S12, eukaryotic 40S ribosomal protein S23 and similar proteins. S12 and S23 are located at the interface of the large and small ribosomal subunits, adjacent to the decoding ...
    Nucleotide Protein
    Heading Accession and Version

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