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    ETFDH electron transfer flavoprotein dehydrogenase [ Canis lupus familiaris (dog) ]

    Gene ID: 475480, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ETFDHprovided by VGNC
    Official Full Name
    electron transfer flavoprotein dehydrogenaseprovided by VGNC
    Primary source
    VGNC:VGNC:40489
    See related
    Ensembl:ENSCAFG00845011837
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See ETFDH in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (56495410..56525823)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (56114006..56142677)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (56147031..56175699)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (55734215..55762881)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (55833373..55862247)

    Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119869360 Neighboring gene relaxin family peptide receptor 1 Neighboring gene chromosome 15 C4orf46 homolog Neighboring gene uncharacterized LOC111090121 Neighboring gene uncharacterized LOC102157159 Neighboring gene peptidylprolyl isomerase D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables electron-transferring-flavoprotein dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron-sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in electron transport chain IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial
    NP_001277019.1
    XP_038543118.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001290090.1 → NP_001277019.1  electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial

      Status: VALIDATED

      Source sequence(s)
      JAAUVH010000372
      UniProtKB/TrEMBL
      A0A8C0MFJ0, A0A8C0QU63, A0A8I3N9K6, A0A8P0SDN9
      Related
      ENSCAFP00845016544.1, ENSCAFT00845021044.1
      Conserved Domains (2) summary
      COG0644
      Location:67 → 529
      FixC; Dehydrogenase (flavoprotein) [Energy production and conversion]
      pfam05187
      Location:512 → 615
      ETF_QO; Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051819.1 Reference ROS_Cfam_1.0

      Range
      56495410..56525823
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038687190.1 → XP_038543118.1  electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A8C0M8C9
      Conserved Domains (2) summary
      COG0644
      Location:27 → 423
      FixC; Dehydrogenase (flavoprotein) [Energy production and conversion]
      pfam05187
      Location:406 → 509
      ETF_QO; Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049275.1 Alternate UMICH_Zoey_3.1

      Range
      55734215..55762881
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

      Range
      55833373..55862247
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

      Range
      56147031..56175699
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      56114006..56142677
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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