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    AGOS_AEL153W AEL153Wp [ Eremothecium gossypii ATCC 10895 ]

    Gene ID: 4620893, updated on 16-Nov-2023

    Summary

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    Gene symbol
    AGOS_AEL153W
    Gene description
    AEL153Wp
    Locus tag
    AGOS_AEL153W
    Gene type
    protein coding
    RNA name
    AEL153Wp
    RefSeq status
    PROVISIONAL
    Organism
    Eremothecium gossypii ATCC 10895 (strain: ATCC 10895, culture-collection: ATCC:10895)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
    Old locus tag
    AEL153W
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    Genomic context

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    See AGOS_AEL153W in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    1
    Sequence:
    Chromosome: V; NC_005786.2 (342472..344175)

    Chromosome V - NC_005786.2Genomic Context describing neighboring genes Neighboring gene AEL155Cp Neighboring gene AEL154Cp Neighboring gene ncRNA Neighboring gene 40S ribosomal protein S14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_005786.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Ashbya gossypii genome as a tool for mapping the ancient Saccharomyces cerevisiae genome. Dietrich FS, et al. Science, 2004 Apr 9. PMID 15001715
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Pwp2p-containing subcomplex of 90S preribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of small-subunit processome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    AEL153Wp
    NP_984708.1
    • Syntenic homolog of Saccharomyces cerevisiae YJL069C (UTP18)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_005786.2 Reference assembly

      Range
      342472..344175
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_210061.1 → NP_984708.1  AEL153Wp [Eremothecium gossypii ATCC 10895]

      See identical proteins and their annotated locations for NP_984708.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q758A5
      Conserved Domains (3) summary
      COG2319
      Location:232 → 566
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:234 → 273
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:231 → 563
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials