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    kto kohtalo [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 44830, updated on 2-Nov-2024

    Summary

    Official Symbol
    ktoprovided by FlyBase
    Official Full Name
    kohtaloprovided by FlyBase
    Primary source
    FLYBASE:FBgn0001324
    Locus tag
    Dmel_CG8491
    See related
    AllianceGenome:FB:FBgn0001324
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Brm @ Kto; CG8491; Dmel\CG8491; dTrap230; dTRAP230; Kto; KTO; Kto/Med12; l(3)76BDc; med12; Med12; MED12; med12/kto; psg14; siren1; SRB8; Srb8/KTO/TRAP230; Trap230
    Summary
    Enables transcription coregulator activity. Involved in several processes, including autophagic cell death; positive regulation of canonical Wnt signaling pathway; and sex comb development. Located in polytene chromosome. Part of CKM complex; core mediator complex; and mediator complex. Is expressed in embryonic/larval salivary gland; organism; and spermatozoon. Used to study obesity. Human ortholog(s) of this gene implicated in FG syndrome; leiomyosarcoma; major depressive disorder; phobic disorder; and syndromic X-linked intellectual disorder Lujan-Fryns-type. Orthologous to human MED12 (mediator complex subunit 12) and MED12L (mediator complex subunit 12L). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See kto in Genome Data Viewer
    Location:
    76D1-76D1; 3-46 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (19836614..19844944)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (19829714..19838044)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene tricornered Neighboring gene uncharacterized protein Neighboring gene PAPS synthetase Neighboring gene long non-coding RNA:CR45433

    Genomic regions, transcripts, and products

    Bibliography

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables transcription coactivator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables transcription coregulator activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    part_of CKM complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of core mediator complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    part_of mediator complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of mediator complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of mediator complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of mediator complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    located_in polytene chromosome IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    kohtalo
    Names
    CG8491-PA
    CG8491-PB
    khotalo
    kto-PA
    kto-PB
    mediator complex subunit 12

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      19836614..19844944
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_080047.2NP_524786.1  kohtalo, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524786.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8MQW4, Q9GPH4, Q9VW47
      Related
      FBpp0074653, FBtr0074884
      Conserved Domains (2) summary
      pfam09497
      Location:99157
      Med12; Transcription mediator complex subunit Med12
      pfam12145
      Location:390856
      Med12-LCEWAV; Eukaryotic Mediator 12 subunit domain
    2. NM_001259906.1NP_001246835.1  kohtalo, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001246835.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      C0PUX8, M9NDW3