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    CG11882 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43446, updated on 18-Sep-2024

    Summary

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    Official Symbol
    CG11882provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0039642
    Locus tag
    Dmel_CG11882
    See related
    AllianceGenome:FB:FBgn0039642
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG11882
    Orthologs
    all
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    Genomic context

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    See CG11882 in Genome Data Viewer
    Location:
    98F12-98F12; 3-97 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (29147016..29148172, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (24972738..24973894, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Vacuolar H[+] ATPase 100kD subunit 1 Neighboring gene Suppressor of ER stress-induced death Neighboring gene Alg13 UDP-N-acetylglucosaminyltransferase subunit Neighboring gene uncharacterized protein Neighboring gene Phosphoglyceromutase 78 Neighboring gene eukaryotic translation initiation factor 2D Neighboring gene Stem-loop binding protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The asymmetrically segregating lncRNA cherub is required for transforming stem cells into malignant cells. Landskron L, et al. Elife, 2018 Mar 27. PMID 29580384, Free PMC Article
    2. Vector and parameters for targeted transgenic RNA interference in Drosophila melanogaster. Ni JQ, et al. Nat Methods, 2008 Jan. PMID 18084299, Free PMC Article
    3. In vivo analysis of proteomes and interactomes using Parallel Affinity Capture (iPAC) coupled to mass spectrometry. Rees JS, et al. Mol Cell Proteomics, 2011 Jun. PMID 21447707, Free PMC Article
    4. SUMO-Enriched Proteome for Drosophila Innate Immune Response. Handu M, et al. G3 (Bethesda), 2015 Aug 18. PMID 26290570, Free PMC Article
    5. Tissue-specific (ts)CRISPR as an efficient strategy for in vivo screening in Drosophila. Meltzer H, et al. Nat Commun, 2019 May 8. PMID 31068592, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG11882-PA
    CG11882-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      29147016..29148172 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_143419.2 → NP_651676.1  uncharacterized protein Dmel_CG11882, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_651676.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IGF4, Q9VAN8
      Related
      FBpp0084780
      Conserved Domains (1) summary
      pfam14958
      Location:47 → 178
      DUF4506; Domain of unknown function (DUF4506)

    2. NM_001276127.1 → NP_001263056.1  uncharacterized protein Dmel_CG11882, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001263056.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IGF4, Q9VAN8
      Conserved Domains (1) summary
      pfam14958
      Location:47 → 178
      DUF4506; Domain of unknown function (DUF4506)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8IGF4 Q8IGF4
    Q9VAN8 Q9VAN8

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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