U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Tmem221 transmembrane protein 221 [ Mus musculus (house mouse) ]

    Gene ID: 434325, updated on 17-Aug-2024

    Summary

    Official Symbol
    Tmem221provided by MGI
    Official Full Name
    transmembrane protein 221provided by MGI
    Primary source
    MGI:MGI:3525074
    See related
    Ensembl:ENSMUSG00000043664 AllianceGenome:MGI:3525074
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human TMEM221 (transmembrane protein 221). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in adrenal adult (RPKM 13.4), ovary adult (RPKM 11.1) and 9 other tissues See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Tmem221 in Genome Data Viewer
    Location:
    8 B3.3; 8 34.43 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (72006947..72011659, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (71554303..71559015, complement)

    Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E1759 Neighboring gene bone marrow stromal cell antigen 2 Neighboring gene STARR-positive B cell enhancer ABC_E6652 Neighboring gene multivesicular body subunit 12A Neighboring gene STARR-positive B cell enhancer ABC_E6653 Neighboring gene nucleoredoxin-like 1 Neighboring gene STARR-positive B cell enhancer ABC_E10508 Neighboring gene solute carrier family 27 (fatty acid transporter), member 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100462.1NP_001093932.1  transmembrane protein 221

      See identical proteins and their annotated locations for NP_001093932.1

      Status: PROVISIONAL

      Source sequence(s)
      BC147831
      Consensus CDS
      CCDS52586.1
      UniProtKB/Swiss-Prot
      B2RWI9, Q8K071
      Related
      ENSMUSP00000058317.7, ENSMUST00000052072.8
      Conserved Domains (1) summary
      pfam15038
      Location:10186
      Jiraiya; Jiraiya

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000074.7 Reference GRCm39 C57BL/6J

      Range
      72006947..72011659 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006509705.4XP_006509768.1  transmembrane protein 221 isoform X1

      Conserved Domains (1) summary
      pfam15038
      Location:93186
      Jiraiya