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    CPT2 carnitine palmitoyltransferase 2 [ Gallus gallus (chicken) ]

    Gene ID: 424649, updated on 10-Oct-2024

    Summary

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    Official Symbol
    CPT2provided by CGNC
    Official Full Name
    carnitine palmitoyltransferase 2provided by CGNC
    Primary source
    CGNC:8117
    See related
    Ensembl:ENSGALG00010025145
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CPT2 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (24266657..24326803)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (24278934..24339024)

    Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054037 Neighboring gene enoyl-CoA hydratase domain containing 2 Neighboring gene sterol carrier protein 2 Neighboring gene podocan Neighboring gene solute carrier family 1 member 7 Neighboring gene microRNA 6623 Neighboring gene uncharacterized LOC124418131 Neighboring gene CXXC motif containing zinc binding protein Neighboring gene microRNA 1675

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carnitine O-palmitoyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid beta-oxidation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    carnitine O-palmitoyltransferase 2, mitochondrial
    Names
    carnitine palmitoyltransferase II
    NP_001026458.3
    XP_025008648.2
    XP_040560613.1
    XP_046778798.1
    XP_046778799.1
    XP_046778800.1
    XP_046800467.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031287.3 → NP_001026458.3  carnitine O-palmitoyltransferase 2, mitochondrial precursor

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000239
      UniProtKB/TrEMBL
      A0A8V1A689, A0A8V1A966
      Related
      ENSGALP00010037929.1, ENSGALT00010061347.1

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      24266657..24326803
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040704679.2 → XP_040560613.1  carnitine O-palmitoyltransferase 2, mitochondrial isoform X3

      UniProtKB/TrEMBL
      A0A8V1A966

    2. XM_046944511.1 → XP_046800467.1  carnitine O-palmitoyltransferase 2, mitochondrial isoform X1

      Related
      ENSGALP00010037927.1, ENSGALT00010061344.1

    3. XM_025152880.3 → XP_025008648.2  carnitine O-palmitoyltransferase 2, mitochondrial isoform X2

      UniProtKB/TrEMBL
      A0A8V1A966

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      24278934..24339024
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046922844.1 → XP_046778800.1  carnitine O-palmitoyltransferase 2, mitochondrial isoform X3

    2. XM_046922842.1 → XP_046778798.1  carnitine O-palmitoyltransferase 2, mitochondrial isoform X1

    3. XM_046922843.1 → XP_046778799.1  carnitine O-palmitoyltransferase 2, mitochondrial isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

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    Research Materials