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    UHRF1 ubiquitin like with PHD and ring finger domains 1 [ Gallus gallus (chicken) ]

    Gene ID: 420154, updated on 17-Aug-2024

    Summary

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    Symbol
    UHRF1provided by CGNC
    Full Name
    ubiquitin like with PHD and ring finger domains 1provided by CGNC
    Primary source
    CGNC:3031
    See related
    Ensembl:ENSGALG00010028528
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See UHRF1 in Genome Data Viewer
    Location:
    chromosome: 28
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 28 NC_052559.1 (5277655..5308196, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 28 NC_052600.1 (4839723..4870256, complement)

    Chromosome 28 - NC_052559.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase, receptor type S Neighboring gene uncharacterized LOC107055377 Neighboring gene lysine demethylase 4B Neighboring gene uncharacterized LOC124417447 Neighboring gene uncharacterized LOC121107763 Neighboring gene perilipin 3 Neighboring gene toll like receptor adaptor molecule 1 Neighboring gene fem-1 homolog A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. UHRF genes regulate programmed interdigital tissue regression and chondrogenesis in the embryonic limb. Sanchez-Fernandez C, et al. Cell Death Dis, 2019 Apr 25. PMID 31024001, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of gene expression via chromosomal CpG island methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase UHRF1
    Names
    ubiquitin-like, containing PHD and RING finger domains, 1
    XP_015155673.3
    XP_025000087.2
    XP_040548938.2
    XP_040548939.2
    XP_046760687.1
    XP_046760688.1
    XP_046789966.1
    XP_046789967.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052559.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      5277655..5308196 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046904732.1 → XP_046760688.1  E3 ubiquitin-protein ligase UHRF1 isoform X3

    2. XM_046904731.1 → XP_046760687.1  E3 ubiquitin-protein ligase UHRF1 isoform X3

    3. XM_025144319.3 → XP_025000087.2  E3 ubiquitin-protein ligase UHRF1 isoform X2

    4. XM_015300187.4 → XP_015155673.3  E3 ubiquitin-protein ligase UHRF1 isoform X1

      Related
      ENSGALP00010042527.1, ENSGALT00010069085.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052600.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      4839723..4870256 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046934011.1 → XP_046789967.1  E3 ubiquitin-protein ligase UHRF1 isoform X3

    2. XM_046934010.1 → XP_046789966.1  E3 ubiquitin-protein ligase UHRF1 isoform X3

    3. XM_040693005.2 → XP_040548939.2  E3 ubiquitin-protein ligase UHRF1 isoform X2

    4. XM_040693004.2 → XP_040548938.2  E3 ubiquitin-protein ligase UHRF1 isoform X1

    Nucleotide Protein Strain
    Heading Accession and Version

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