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    Cog6 conserved oligomeric Golgi complex subunit 6 [ Apis mellifera (honey bee) ]

    Gene ID: 410298, updated on 2-Oct-2024

    Summary

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    Gene symbol
    Cog6
    Gene description
    conserved oligomeric Golgi complex subunit 6
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apis mellifera
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Apis
    Also known as
    GB17425; GB55187
    Orthologs
    fruit fly all
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    Genomic context

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    See Cog6 in Genome Data Viewer
    Location:
    chromosome: LG11
    Exon count:
    9
    Annotation release Status Assembly LG Location
    104 current Amel_HAv3.1 (GCF_003254395.2) LG11 NC_037648.1 (1473015..1475693)
    103 previous assembly Amel_4.5 (GCF_000002195.4) LG11 NC_007080.3 (1785920..1788553, complement)

    Linkage Group LG11 - NC_037648.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-9865 Neighboring gene b(0,+)-type amino acid transporter 1 Neighboring gene sorting nexin 16 Neighboring gene serine/threonine-protein kinase N Neighboring gene flocculation protein FLO11 Neighboring gene uncharacterized LOC100576289

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Differential expression of endogenous plant cell wall degrading enzyme genes in the stick insect (Phasmatodea) midgut. Shelomi M, et al. BMC Genomics, 2014 Oct 21. PMID 25331961, Free PMC Article
    2. Insights into social insects from the genome of the honeybee Apis mellifera. Honeybee Genome Sequencing Consortium. Nature, 2006 Oct 26. PMID 17073008, Free PMC Article
    3. ProtoBee: hierarchical classification and annotation of the honey bee proteome. Kaplan N, et al. Genome Res, 2006 Nov. PMID 17065614, Free PMC Article
    4. Finding the missing honey bee genes: lessons learned from a genome upgrade. Elsik CG, et al. BMC Genomics, 2014 Jan 30. PMID 24479613, Free PMC Article
    5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in intra-Golgi vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Golgi transport complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    conserved oligomeric Golgi complex subunit 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apis mellifera Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Amel_HAv3.1 Primary Assembly

    Genomic

    1. NC_037648.1 Reference Amel_HAv3.1 Primary Assembly

      Range
      1473015..1475693
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_393779.7 → XP_393779.1  conserved oligomeric Golgi complex subunit 6

      UniProtKB/TrEMBL
      A0A7M7R6K5, A0A8B9AWM0
      Conserved Domains (1) summary
      pfam06419
      Location:31 → 620
      COG6; Conserved oligomeric complex COG6
    Nucleotide Protein Strain
    Heading Accession and Version

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