U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    PpBr36_04631 hypothetical protein [ Pyricularia pennisetigena ]

    Gene ID: 40734095, updated on 26-Jun-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PpBr36_04631
    Gene description
    hypothetical protein
    Locus tag
    PpBr36_04631
    See related
    FungiDB:PpBr36_04631; VEuPathDB:PpBr36_04631
    Gene type
    protein coding
    RNA name
    uncharacterized protein
    RefSeq status
    PROVISIONAL
    Organism
    Pyricularia pennisetigena (strain: Br36, nat-host: Cenchrus echinatus)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Magnaporthales; Pyriculariaceae; Pyricularia
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PpBr36_04631 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    2
    Sequence:
    Chromosome: 6; NC_043744.1 (2683701..2687403, complement)

    Chromosome 6 - NC_043744.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_043744.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Blast Fungal Genomes Show Frequent Chromosomal Changes, Gene Gains and Losses, and Effector Gene Turnover. Gómez Luciano LB, et al. Mol Biol Evol, 2019 Jun 1. PMID 30835262
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chitin synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell periphery IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cell septum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_043744.1 Reference assembly

      Range
      2683701..2687403 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029891790.1 → XP_029749680.1  hypothetical protein PpBr36_04631 [Pyricularia pennisetigena]

      Status: PROVISIONAL

      Conserved Domains (4) summary
      COG1215
      Location:620 → 951
      BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
      pfam01644
      Location:509 → 671
      Chitin_synth_1; Chitin synthase
      pfam08407
      Location:438 → 508
      Chitin_synth_1N; Chitin synthase N-terminal
      pfam15449
      Location:4 → 372
      Retinal; Retinal protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases