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    Psn Presenilin [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40260, updated on 2-Nov-2024

    Summary

    Official Symbol
    Psnprovided by FlyBase
    Official Full Name
    Presenilinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0284421
    Locus tag
    Dmel_CG18803
    See related
    AllianceGenome:FB:FBgn0284421
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    0480/15; 0493/14; 493/14; CG18803; CG5868; Dmel\CG18803; DmPS; Dps; DPS; dPsn; DPsn; DrosPS; gamma-secretase; l(3)77CDb; l(3)S048015a; l(3)S049314; l(3)S049314a; pres; PS; PS1; psn; PSN
    Summary
    Enables aspartic endopeptidase activity, intramembrane cleaving and protein homodimerization activity. Involved in several processes, including amyloid-beta formation; learning or memory; and membrane protein proteolysis. Located in apical plasma membrane; late endosome; and recycling endosome. Part of gamma-secretase complex. Is expressed in several structures, including anterior-posterior subdivision of organism; female germline cell; imaginal disc; pigment cell; and wing vein. Used to study Alzheimer's disease; Alzheimer's disease 3; dilated cardiomyopathy; and early-onset Parkinson's disease. Human ortholog(s) of this gene implicated in Alzheimer's disease (multiple); breast cancer; dilated cardiomyopathy (multiple); frontotemporal dementia (multiple); and hidradenitis suppurativa. Orthologous to human PSEN1 (presenilin 1) and PSEN2 (presenilin 2). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    NEW
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    Genomic context

    See Psn in Genome Data Viewer
    Location:
    77C3-77C3; 3-47 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (20432468..20435156)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (20425568..20428256)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Lipoic acid synthase Neighboring gene mitochondrial ribosomal protein L15 Neighboring gene CTBP-interacting protein Neighboring gene long non-coding RNA:CR45176 Neighboring gene 4-hydroxyphenylpyruvate dioxygenase

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables aspartic endopeptidase activity, intramembrane cleaving IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables aspartic endopeptidase activity, intramembrane cleaving IEA
    Inferred from Electronic Annotation
    more info
     
    enables endopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables endopeptidase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables endopeptidase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein homodimerization activity IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in Notch receptor processing IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in Notch receptor processing, ligand-dependent IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in Notch receptor processing, ligand-dependent IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in Notch signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in Notch signaling pathway IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in Notch signaling pathway IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    involved_in Notch signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in amyloid-beta formation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in amyloid-beta formation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in amyloid-beta formation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in apoptotic process IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in associative learning IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in calcium ion homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in copper ion import IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in membrane protein ectodomain proteolysis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in membrane protein ectodomain proteolysis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in protein processing IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in protein processing IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in proteolysis IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in regulation of Notch signaling pathway IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in regulation of heart rate IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in short-term memory IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    involved_in wing disc dorsal/ventral pattern formation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    located_in apical plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of gamma-secretase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of gamma-secretase complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of gamma-secretase complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    located_in late endosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
     
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in recycling endosome IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    presenilin
    Names
    CG18803-PA
    CG18803-PB
    CG18803-PC
    CG18803-PD
    CG18803-PE
    Psn-PA
    Psn-PB
    Psn-PC
    Psn-PD
    Psn-PE
    dPresenilin
    gamma-secretase
    gamma-secretase component
    lethal (3) S048015a
    lethal (3) S049314a
    pre-senelin
    NP_001137988.1
    NP_001262110.1
    NP_001262111.1
    NP_524184.1
    NP_730535.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      20432468..20435156
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_079460.2NP_524184.1  presenilin, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524184.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O02194, O02395, O76802, O96340, Q9TY80, Q9V3L9, Q9V3S1
      UniProtKB/TrEMBL
      M9PG70
      Related
      FBpp0077850, FBtr0078192
      Conserved Domains (1) summary
      pfam01080
      Location:98531
      Presenilin; Presenilin
    2. NM_001275181.1NP_001262110.1  presenilin, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262110.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PFS2
      Conserved Domains (1) summary
      pfam01080
      Location:98517
      Presenilin; Presenilin
    3. NM_001275182.1NP_001262111.1  presenilin, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262111.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O02194, O02395, O76802, O96340, Q9TY80, Q9V3L9, Q9V3S1
      UniProtKB/TrEMBL
      M9PG70
      Conserved Domains (1) summary
      pfam01080
      Location:98531
      Presenilin; Presenilin
    4. NM_168856.3NP_730535.1  presenilin, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_730535.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PFS2
      Related
      FBpp0077851
      Conserved Domains (1) summary
      pfam01080
      Location:98517
      Presenilin; Presenilin
    5. NM_001144516.2NP_001137988.1  presenilin, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137988.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B7Z090
      Conserved Domains (1) summary
      pfam01080
      Location:98498
      Presenilin; Presenilin