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    Prb1b proline-rich protein BstNI subfamily 1B [ Mus musculus (house mouse) ]

    Gene ID: 381832, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Prb1bprovided by MGI
    Official Full Name
    proline-rich protein BstNI subfamily 1Bprovided by MGI
    Primary source
    MGI:MGI:1927478
    See related
    Ensembl:ENSMUSG00000107874 AllianceGenome:MGI:1927478
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    MP5; Prpmp5
    Summary
    Orthologous to several human genes including PRR4 (proline rich 4); PRB1 (proline rich protein BstNI subfamily 1); and PRB2 (proline rich protein BstNI subfamily 2). [provided by Alliance of Genome Resources, Nov 2024]
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    Genomic context

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    See Prb1b in Genome Data Viewer
    Location:
    6 G1; 6 64.03 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (132288553..132291706, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (132311590..132314743, complement)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene Neighboring gene proline-rich protein BstNI subfamily 1A Neighboring gene cyclin-dependent kinase 4 pseudogene Neighboring gene STARR-seq mESC enhancer starr_17505 Neighboring gene DnaJ (Hsp40) homolog, subfamily A, member 1 pseudogene Neighboring gene proline-rich protein BstNI subfamily 1C Neighboring gene cyclin-dependent kinase 4 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. cDNA clones for mouse parotid proline-rich proteins. mRNA regulation by isoprenaline and the nucleotide sequence of proline-rich protein cDNA MP5. Layfield R, et al. Eur J Biochem, 1992 Mar 1. PMID 1339347
    2. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
    3. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
    4. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
    5. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Clone Names

    • MGC117856

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    proline-rich protein MP5
    Names
    proline-rich protein PRP MP5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001024705.2 → NP_001019876.2  proline-rich protein MP5 precursor

      Status: VALIDATED

      Source sequence(s)
      AC135117, AK132583
      Consensus CDS
      CCDS39672.1
      UniProtKB/TrEMBL
      E9PXN1
      Related
      ENSMUSP00000047347.9, ENSMUST00000048686.9
      Conserved Domains (1) summary
      pfam15240
      Location:138 → 214
      Pro-rich; Proline-rich

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      132288553..132291706 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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