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    CXQ85_002303 hypothetical protein [ [Candida] haemuloni ]

    Gene ID: 37007634, updated on 17-May-2024

    Summary

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    Gene symbol
    CXQ85_002303
    Gene description
    hypothetical protein
    Locus tag
    CXQ85_002303
    See related
    FungiDB:CXQ85_002303; VEuPathDB:CXQ85_002303
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    [Candida] haemuloni (strain: B11899, nat-host: Homo sapiens)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Metschnikowiaceae; Clavispora; Clavispora/Candida clade
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    Genomic context

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    See CXQ85_002303 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_020289904.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020289904.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol-3-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in autophagosome assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in autophagy of mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in piecemeal microautophagy of the nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in reticulophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Las1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extrinsic component of membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in phagophore assembly site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_020289904.1 Reference assembly

      Range
      1510945..1517853
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025485986.1 → XP_025341451.1  hypothetical protein CXQ85_002303 [[Candida] haemuloni]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2V1AUB5, A0A8H4D7D9
      Conserved Domains (3) summary
      pfam04031
      Location:10 → 151
      Las1; Las1-like
      pfam09333
      Location:2044 → 2138
      ATG_C; Autophagy-related protein C terminal domain
      pfam13329
      Location:1225 → 1385
      ATG2_CAD; Autophagy-related protein 2 CAD motif
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases