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    Tb927.3.1220 hypothetical protein [ Trypanosoma brucei brucei TREU927 ]

    Gene ID: 3656060, updated on 17-May-2024

    Summary

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    Gene symbol
    Tb927.3.1220
    Gene description
    hypothetical protein
    Primary source
    TriTrypDB:Tb927.3.1220
    Locus tag
    Tb927.3.1220
    See related
    VEuPathDB:Tb927.3.1220
    Gene type
    protein coding
    RNA name
    hypothetical protein, conserved
    RefSeq status
    PROVISIONAL
    Organism
    Trypanosoma brucei brucei TREU927 (strain: 927/4 GUTat10.1, isolate: 927/4 GUTat10.1, sub-species: brucei)
    Lineage
    Eukaryota; Discoba; Euglenozoa; Kinetoplastea; Metakinetoplastina; Trypanosomatida; Trypanosomatidae; Trypanosoma
    Also known as
    Tb03.1J15.700
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    Genomic context

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    See Tb927.3.1220 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_007276.1 (304350..305885)

    Chromosome 3 - NC_007276.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene protein transport protein Sec24C, putative Neighboring gene hypothetical protein Neighboring gene serine/threonine-protein phosphatase, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007276.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the African trypanosome Trypanosoma brucei. Berriman M, et al. Science, 2005 Jul 15. PMID 16020726
    2. Comparative genomics of trypanosomatid parasitic protozoa. El-Sayed NM, et al. Science, 2005 Jul 15. PMID 16020724

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 5'-flap endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables crossover junction DNA endonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Slx1-Slx4 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007276.1 Reference assembly

      Range
      304350..305885
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_838623.1 → XP_843716.1  hypothetical protein, conserved [Trypanosoma brucei brucei TREU927]

      See identical proteins and their annotated locations for XP_843716.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q57XV5
      UniProtKB/TrEMBL
      A0A3L6LDE6, D6XD30
      Conserved Domains (1) summary
      cd10455
      Location:5 → 81
      GIY-YIG_SLX1; Catalytic GIY-YIG domain of yeast structure-specific endonuclease subunit SLX1 and its eukaryotic homologs
    Protein Accession Links
    GenPept Link UniProtKB Link
    AAZ10157.1
    Q57XV5.1

    Gene LinkOut

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