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    CNK03070 hypothetical protein [ Cryptococcus neoformans var. neoformans JEC21 ]

    Gene ID: 3254497, updated on 17-May-2024

    Summary

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    Gene symbol
    CNK03070
    Gene description
    hypothetical protein
    Locus tag
    CNK03070
    See related
    FungiDB:CNK03070; VEuPathDB:CNK03070
    Gene type
    protein coding
    RNA name
    hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Cryptococcus neoformans var. neoformans JEC21 (strain: JEC21, serotype: D)
    Lineage
    Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Cryptococcus; Cryptococcus neoformans species complex
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    Genomic context

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    See CNK03070 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    8
    Sequence:
    Chromosome: 11; NC_006680.1 (904202..908937, complement)

    Chromosome 11 - NC_006680.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene C2H2 zinc finger protein Zas1A, putative Neighboring gene 50s ribosomal protein l36, putative Neighboring gene helicase, putative

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006680.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the basidiomycetous yeast and human pathogen Cryptococcus neoformans. Loftus BJ, et al. Science, 2005 Feb 25. PMID 15653466, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006680.1 Reference assembly

      Range
      904202..908937 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_567900.2 → XP_567900.1  hypothetical protein CNK03070 [Cryptococcus neoformans var. neoformans JEC21]

      See identical proteins and their annotated locations for XP_567900.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q5K962
      Conserved Domains (4) summary
      sd00019
      Location:54 → 73
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam13465
      Location:65 → 90
      zf-H2C2_2; Zinc-finger double domain
      pfam15909
      Location:45 → 101
      zf-C2H2_8; C2H2-type zinc ribbon
      cl23766
      Location:669 → 784
      fungal_TF_MHR; fungal transcription factor regulatory middle homology region
    Nucleotide Protein
    Heading Accession and Version

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