U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    RCAP_RS17615 LysR substrate-binding domain-containing protein [ Rhodobacter capsulatus SB 1003 ]

    Gene ID: 31492339, updated on 22-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    RCAP_RS17615
    Gene description
    LysR substrate-binding domain-containing protein
    Locus tag
    RCAP_RS17615
    Gene type
    protein coding
    Organism
    Rhodobacter capsulatus SB 1003 (strain: SB 1003)
    Lineage
    Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Rhodobacter group; Rhodobacter
    Old locus tag
    RCAP_rcp00026
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    plasmid: pRCB133
    Sequence:
    NC_014035.1 (18110..19000, complement)

    NC_014035.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene NAD(P)-dependent oxidoreductase Neighboring gene NUDIX hydrolase Neighboring gene nuclear transport factor 2 family protein Neighboring gene SDR family oxidoreductase Neighboring gene helix-turn-helix transcriptional regulator Neighboring gene type II toxin-antitoxin system RelE/ParE family toxin

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_014035.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Complete genome sequence of the photosynthetic purple nonsulfur bacterium Rhodobacter capsulatus SB 1003. Strnad H, et al. J Bacteriol, 2010 Jul. PMID 20418398, Free PMC Article
    2. The structure of the cofactor-binding fragment of the LysR family member, CysB: a familiar fold with a surprising subunit arrangement. Tyrrell R, et al. Structure, 1997 Aug 15. PMID 9309218

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    LysR substrate-binding domain-containing protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_014035.1 Reference assembly

      Range
      18110..19000 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_013069256.1 LysR substrate-binding domain-containing protein [Rhodobacter capsulatus]

      See identical proteins and their annotated locations for WP_013069256.1

      UniProtKB/TrEMBL
      D5AVE9
      Conserved Domains (2) summary
      PRK09791
      Location:5 → 137
      PRK09791; LysR family transcriptional regulator
      cl21456
      Location:91 → 287
      Periplasmic_Binding_Protein_Type_2; Type 2 periplasmic binding fold superfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases