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    CG3038 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 30970, updated on 10-May-2024

    Summary

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    Official Symbol
    CG3038provided by FlyBase
    Primary source
    FLYBASE:FBgn0040373
    Locus tag
    Dmel_CG3038
    See related
    AllianceGenome:FB:FBgn0040373
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    dbeta3GnT; Dmel\CG3038; EG:BACR37P7.1; GalT3
    Summary
    Predicted to enable glycosyltransferase activity. Predicted to be involved in protein glycosylation. Predicted to be active in Golgi membrane. Is expressed in organism. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See CG3038 in Genome Data Viewer
    Location:
    1A1-1A1; 1-0 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (243954..245856, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (137987..139889, complement)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR43863 Neighboring gene uncharacterized protein Neighboring gene trynity Neighboring gene G9a Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Drosophila G9a is a nonessential gene. Seum C, et al. Genetics, 2007 Nov. PMID 18039887, Free PMC Article
    2. The Drosophila gene brainiac encodes a glycosyltransferase putatively involved in glycosphingolipid synthesis. Schwientek T, et al. J Biol Chem, 2002 Sep 6. PMID 12130651
    3. Recombination, dominance and selection on amino acid polymorphism in the Drosophila genome: contrasting patterns on the X and fourth chromosomes. Sheldahl LA, et al. Genetics, 2003 Nov. PMID 14668375, Free PMC Article
    4. An analysis of genetic changes during the divergence of Drosophila species. Sousa-Neves R, et al. PLoS One, 2010 May 5. PMID 20463966, Free PMC Article
    5. Identification of transcriptional responsive genes to acetic acid, ethanol, and 2-phenylethanol exposure in Drosophila melanogaster. Seong KM, et al. Pestic Biochem Physiol, 2020 May. PMID 32359537

    See all (31) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables glycosyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables hexosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein O-linked glycosylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in Golgi membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG3038-PA
    CG3038-PB
    CG3038-PC
    NP_001284732.1
    NP_569833.1
    NP_726658.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      243954..245856 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001297803.1 → NP_001284732.1  uncharacterized protein Dmel_CG3038, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001284732.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9V394, X2JD78
      Conserved Domains (1) summary
      cl21608
      Location:103 → 268
      Galactosyl_T; Galactosyltransferase

    2. NM_166834.2 → NP_726658.1  uncharacterized protein Dmel_CG3038, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_726658.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IRZ0, Q9V394
      Related
      FBpp0070102
      Conserved Domains (1) summary
      cl21608
      Location:73 → 267
      Galactosyl_T; Galactosyltransferase

    3. NM_130477.4 → NP_569833.1  uncharacterized protein Dmel_CG3038, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_569833.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95RP8, Q9V394
      Related
      FBpp0070103
      Conserved Domains (1) summary
      cl21608
      Location:103 → 297
      Galactosyl_T; Galactosyltransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6W4I1 Q6W4I1
    Q6W4J1 Q6W4J1
    Q6W4K1 Q6W4K1
    Q8IRZ0 Q8IRZ0
    Q95RP8 Q95RP8
    Q9V394 Q9V394
    X2JD78 X2JD78

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