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    COCH_RS04660 glycoside hydrolase family 97 protein [ Capnocytophaga ochracea DSM 7271 ]

    Gene ID: 29676401, updated on 24-Oct-2024

    Summary

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    Gene symbol
    COCH_RS04660
    Gene description
    glycoside hydrolase family 97 protein
    Locus tag
    COCH_RS04660
    Gene type
    protein coding
    Organism
    Capnocytophaga ochracea DSM 7271 (strain: DSM 7271, culture-collection: DSM:7271, type-material: type strain of Capnocytophaga ochracea)
    Lineage
    Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga
    Old locus tag
    Coch_0928
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    Genomic context

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    Sequence:
    NC_013162.1 (1077051..1079237, complement)

    NC_013162.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene DUF6377 domain-containing protein Neighboring gene glycoside hydrolase family 66 protein Neighboring gene SusF/SusE family outer membrane protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_013162.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. GH97 is a new family of glycoside hydrolases, which is related to the alpha-galactosidase superfamily. Naumoff DG. BMC Genomics, 2005 Aug 30. PMID 16131397, Free PMC Article
    2. Complete genome sequence of Capnocytophaga ochracea type strain (VPI 2845). Mavrommatis K, et al. Stand Genomic Sci, 2009 Sep 24. PMID 21304645, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    glycoside hydrolase family 97 protein
    WP_015782153.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_013162.1 Reference assembly

      Range
      1077051..1079237 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_015782153.1 glycoside hydrolase family 97 protein [Capnocytophaga ochracea]

      See identical proteins and their annotated locations for WP_015782153.1

      UniProtKB/TrEMBL
      A0A2X2RNY0, C7M9D7
      Conserved Domains (3) summary
      pfam10566
      Location:309 → 612
      Glyco_hydro_97; Glycoside hydrolase 97
      pfam14508
      Location:24 → 304
      GH97_N; Glycosyl-hydrolase 97 N-terminal
      pfam14509
      Location:615 → 713
      GH97_C; Glycosyl-hydrolase 97 C-terminal, oligomerization
    Nucleotide Protein
    Heading Accession and Version