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    US1 regulatory protein ICP22 [ Suid alphaherpesvirus 1 ]

    Gene ID: 2952551, updated on 18-Aug-2023

    Summary

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    Gene symbol
    US1
    Gene description
    regulatory protein ICP22
    Locus tag
    SuHV1_gp73
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Suid alphaherpesvirus 1 (strain: Composite of 6 strains, acronym: PRV, acronym: SuHV-1, nat-host: Sus scrofa)
    Lineage
    Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus
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    Genomic context

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    Sequence:
    NC_006151.1 (127387..129391, complement)

    NC_006151.1Genomic Context describing neighboring genes Neighboring gene envelope glycoprotein D Neighboring gene envelope glycoprotein I Neighboring gene envelope glycoprotein E Neighboring gene membrane protein US9 Neighboring gene virion protein US2 Neighboring gene transcriptional regulator ICP4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006151.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The ICP22 protein selectively modifies the transcription of different kinetic classes of pseudorabies virus genes. Takács IF, et al. BMC Mol Biol, 2013 Jan 29. PMID 23360468, Free PMC Article
    2. Complete, annotated sequence of the pseudorabies virus genome. Klupp BG, et al. J Virol, 2004 Jan. PMID 14671123, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. ICP22 protein selectively modifies the transcription of ohter virus genes.
      Title: The ICP22 protein selectively modifies the transcription of different kinetic classes of pseudorabies virus genes.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    regulatory

    • Loc: c127411-127406 experiment = consistent with mRNA size and sense in strain Ka , inference = ab initio prediction:PolyADQ: , regulatory_class = polyA_signal_sequence
    • Loc: c129391-129385 inference = ab initio prediction:TRANSFACFind: , regulatory_class = TATA_box

    General protein information

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    Preferred Names
    regulatory protein ICP22

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006151.1 Reference assembly

      Range
      127387..129391 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_068392.1 regulatory protein ICP22 [Suid alphaherpesvirus 1]

      See identical proteins and their annotated locations for YP_068392.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P24827
      UniProtKB/TrEMBL
      G3G927, I1WXI4, Q5PP73
      Conserved Domains (1) summary
      pfam02479
      Location:55 → 185
      Herpes_IE68; Herpesvirus immediate early protein
    Nucleotide Protein
    Heading Accession and Version

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