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    Bovatus_RS16925 family 43 glycosylhydrolase [ Bacteroides ovatus ]

    Gene ID: 29455379, updated on 6-Jun-2024

    Summary

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    Gene symbol
    Bovatus_RS16925
    Gene description
    family 43 glycosylhydrolase
    Locus tag
    Bovatus_RS16925
    Gene type
    protein coding
    Organism
    Bacteroides ovatus (strain: ATCC 8483, nat-host: Homo sapiens, culture-collection: ATCC:8483, type-material: type strain of Bacteroides ovatus)
    Lineage
    Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
    Old locus tag
    Bovatus_03475
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    Genomic context

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    NZ_CP012938.1Genomic Context describing neighboring genes Neighboring gene TonB-dependent receptor Neighboring gene RagB/SusD family nutrient uptake outer membrane protein Neighboring gene metallophosphoesterase Neighboring gene sugar-binding domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP012938.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cellvibrio japonicus alpha-L-arabinanase 43A has a novel five-blade beta-propeller fold. Nurizzo D, et al. Nat Struct Biol, 2002 Sep. PMID 12198486
    2. Genetic determinants of in vivo fitness and diet responsiveness in multiple human gut Bacteroides. Wu M, et al. Science, 2015 Oct 2. PMID 26430127, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    family 43 glycosylhydrolase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP012938.1 Reference assembly

      Range
      4415501..4416586
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_004307466.1 MULTISPECIES: family 43 glycosylhydrolase [Bacteroides]

      See identical proteins and their annotated locations for WP_004307466.1

      UniProtKB/TrEMBL
      A0A0J9FLP4, A0A1G6GDD5, A0A1Y4VTU1, A0A373GE18, A0A374WQI7, A0A3A6MK57, A0A412C162, A0A412CPB2, A0A943PHD1, D6CZT3, E5CA35, F7M2N6, I9UT45
      Conserved Domains (1) summary
      cd18616
      Location:48 → 332
      GH43_ABN-like; Glycosyl hydrolase family 43 such as arabinan endo-1 5-alpha-L-arabinosidase
    Nucleotide Protein
    Heading Accession and Version