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    PGN_RS05580 hotdog fold domain-containing protein [ Porphyromonas gingivalis ATCC 33277 ]

    Gene ID: 29256369, updated on 6-Jun-2024

    Summary

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    Gene symbol
    PGN_RS05580
    Gene description
    hotdog fold domain-containing protein
    Locus tag
    PGN_RS05580
    Gene type
    protein coding
    Organism
    Porphyromonas gingivalis ATCC 33277 (strain: ATCC 33277, type-material: type strain of Bacteroides gingivalis)
    Lineage
    Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas
    Old locus tag
    PGN_1163
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    Genomic context

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    Sequence:
    NC_010729.1 (1294287..1294676)

    NC_010729.1Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene CoA transferase subunit A Neighboring gene 3-keto-5-aminohexanoate cleavage protein Neighboring gene zinc-binding dehydrogenase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_010729.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic repeats, misassembly and reannotation: a case study with long-read resequencing of Porphyromonas gingivalis reference strains. Acuña-Amador L, et al. BMC Genomics, 2018 Jan 16. PMID 29338683, Free PMC Article
    2. The Hotdog fold: wrapping up a superfamily of thioesterases and dehydratases. Dillon SC, et al. BMC Bioinformatics, 2004 Aug 12. PMID 15307895, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    hotdog fold domain-containing protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_010729.1 Reference assembly

      Range
      1294287..1294676
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_010956200.1 MULTISPECIES: hotdog fold domain-containing protein [Porphyromonas]

      See identical proteins and their annotated locations for WP_010956200.1

      UniProtKB/TrEMBL
      A0A0E2LT64, A0AAF0BEF3, Q7MVJ4
      Conserved Domains (1) summary
      cd03440
      Location:7 → 89
      hot_dog; The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated ...
    Nucleotide Protein
    Heading Accession and Version

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